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Rohith Anand Varikoti, Ph.D.
Rohith Anand Varikoti, Ph.D.
Pacific Northwest National Laboratory
Verified email at mail.uc.edu
Title
Cited by
Cited by
Year
Toxicity originating from thiophene containing drugs: exploring the mechanism using quantum chemical methods
CK Jaladanki, N Taxak, RA Varikoti, PV Bharatam
Chemical research in toxicology 28 (12), 2364-2376, 2015
382015
Structure based virtual screening to identify selective phosphodiesterase 4B inhibitors
RP Gangwal, MV Damre, NR Das, GV Dhoke, A Bhadauriya, RA Varikoti, ...
Journal of Molecular Graphics and Modelling 57, 89-98, 2015
212015
Molecular investigations into the unfoldase action of severing enzymes on microtubules
RA Varikoti, AC Macke, V Speck, JL Ross, RI Dima
Cytoskeleton 77 (5-6), 214-228, 2020
92020
Factors underlying asymmetric pore dynamics of disaggregase and microtubule-severing AAA+ machines
M Damre, A Dayananda, RA Varikoti, G Stan, RI Dima
Biophysical Journal 120 (16), 3437-3454, 2021
82021
Ai-accelerated design of targeted covalent inhibitors for SARS-CoV-2
RP Joshi, KJ Schultz, JW Wilson, A Kruel, RA Varikoti, CJ Kombala, ...
Journal of Chemical Information and Modeling 63 (5), 1438-1453, 2023
62023
Exploring the effect of mechanical anisotropy of protein structures in the unfoldase mechanism of AAA+ molecular machines
RA Varikoti, HYY Fonseka, MS Kelly, A Javidi, M Damre, S Mullen, ...
Nanomaterials 12 (11), 1849, 2022
62022
Structure based de novo design of IspD inhibitors as anti-tubercular agents
RA Varikoti, R Gangwal, G Dhoke, VK Ramaswamy, A Sangamwar
Nature Precedings, 1-1, 2012
52012
Microtubule severing enzymes oligomerization and allostery: a tale of two domains
AC Macke, MS Kelly, RA Varikoti, S Mullen, D Groves, C Forbes, RI Dima
The Journal of Physical Chemistry B 126 (50), 10569-10586, 2022
32022
Modeling the Mechanical Response of Microtubule Lattices to Pressure
L Szatkowski, RA Varikoti, RI Dima
The Journal of Physical Chemistry B 125 (19), 5009-5021, 2021
22021
Integrated data-driven and experimental approaches to accelerate lead optimization targeting SARS-CoV-2 main protease
RA Varikoti, KJ Schultz, CJ Kombala, A Kruel, KR Brandvold, M Zhou, ...
Journal of Computer-Aided Molecular Design 37 (8), 339-355, 2023
12023
Native Mass Spectrometry Dissects the Structural Dynamics of an Allosteric Heterodimer of SARS-CoV-2 Nonstructural Proteins
S Thibert, D Reid, J Wilson, R Varikoti, N Maltseva, K Schultz, A Kruel, ...
2023
Dynamic Molecular Graph-based Implementation for Biophysical Properties Prediction
C Knutson, G Panapitiya, R Varikoti, N Kumar
arXiv preprint arXiv:2212.09991, 2022
2022
Machine Learning-driven Molecular Design for Therapeutic Discovery
RA Varikoti, KJ Schultz, M Zhou, CJ Kombala Nanayakkara Thambiliya, ...
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States), 2022
2022
Breaking down microtubule severing motors with machine learning
AC Macke, RI Dima, RA Varikoti, MS Kelly
Biophysical Journal 121 (3), 116a, 2022
2022
Exploring the Molecular Mechanisms of Microtubule Severing
RA Varikoti
University of Cincinnati, 2021
2021
Breaking down microtubule severing motors: A computational study of lower order katanin oligomers
A Macke, RA Varikoti, R Dima
APS March Meeting Abstracts 2021, F11. 008, 2021
2021
Factors Underlying Asymmetric Dynamics of Disaggregase and Microtubule Severing AAA+ Machines
M Damre, A Dayananda, RA Varikoti, G Stan, RI Dima
bioRxiv, 2020.11. 25.398420, 2020
2020
Molecular dynamics study of Katanin oligomeres: A MT-severing enzyme
M Damre, RA Varikoti, R Dima
Bulletin of the American Physical Society 65, 2020
2020
Role of substrate cooperativity and motor concentration in microtubule severing
RA Varikoti, J Ross, R Dima
Bulletin of the American Physical Society 65, 2020
2020
Mechanical stability of microtubule lattices under high crowdedness
L Szatkowski, R Varikoti, R Dima
Bulletin of the American Physical Society 65, 2020
2020
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