A model of yeast cell‐cycle regulation based on multisite phosphorylation D Barik, WT Baumann, MR Paul, B Novak, JJ Tyson Molecular systems biology 6 (1), 405, 2010 | 153 | 2010 |
Bistability by multiple phosphorylation of regulatory proteins O Kapuy, D Barik, MRD Sananes, JJ Tyson, B Novák Progress in biophysics and molecular biology 100 (1-3), 47-56, 2009 | 96 | 2009 |
T cells translate individual, quantal activation into collective, analog cytokine responses via time-integrated feedbacks GAB Karen E Tkach, Debashis Barik, Guillaume Voisinne, Nicole Malandro ... eLife 3, e01944, 2014 | 71 | 2014 |
Stochastic simulation of enzyme-catalyzed reactions with disparate timescales D Barik, MR Paul, WT Baumann, Y Cao, JJ Tyson Biophysical journal 95 (8), 3563-3574, 2008 | 68 | 2008 |
Langevin dynamics with dichotomous noise; direct simulation and applications D Barik, PK Ghosh, DS Ray Journal of Statistical Mechanics: Theory and Experiment 2006 (03), P03010, 2006 | 68 | 2006 |
Quantum state-dependent diffusion and multiplicative noise: a microscopic approach D Barik, DS Ray Journal of Statistical Physics 120, 339-365, 2005 | 49 | 2005 |
A stochastic model of the yeast cell cycle reveals roles for feedback regulation in limiting cellular variability D Barik, DA Ball, J Peccoud, JJ Tyson PLoS computational biology 12 (12), e1005230, 2016 | 47 | 2016 |
Numerical simulation of transmission coefficient using c-number Langevin equation D Barik, BC Bag, DS Ray The Journal of chemical physics 119 (24), 12973-12980, 2003 | 41 | 2003 |
Quantum escape kinetics over a fluctuating barrier PK Ghosh, D Barik, BC Bag, DS Ray The Journal of chemical physics 123 (22), 2005 | 37 | 2005 |
Noise-induced transition in a quantum system PK Ghosh, D Barik, DS Ray Physics Letters A 342 (1-2), 12-21, 2005 | 35 | 2005 |
Quantum phase-space function formulation of reactive flux theory D Barik, SK Banik, DS Ray The Journal of chemical physics 119 (2), 680-695, 2003 | 34 | 2003 |
Measurement and modeling of transcriptional noise in the cell cycle regulatory network D Ball, N Adames, N Reischmann, D Barik, C Franck, JJ Tyson, ... Cell Cycle 12 (19), 3392-3407, 2013 | 29 | 2013 |
Mathematical modeling identifies Lck as a potential mediator for PD-1 induced inhibition of early TCR signaling T Arulraj, D Barik PloS one 13 (10), e0206232, 2018 | 28 | 2018 |
Escape rate from a metastable state weakly interacting with a heat bath driven by external noise JR Chaudhuri, D Barik, SK Banik Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 73 (5 …, 2006 | 24 | 2006 |
Quantum Brownian motion in C-numbers: Theory and applications D Barik, D Banerjee, DS Ray Nova Science Publishers, 2009 | 23 | 2009 |
Noise-induced quantum transport PK Ghosh, D Barik, DS Ray Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 71 (4 …, 2005 | 20 | 2005 |
Dynamics of a metastable state nonlinearly coupled to a heat bath driven by external noise JR Chaudhuri, D Barik, SK Banik Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 74 (6 …, 2006 | 17 | 2006 |
Anharmonic quantum contribution to vibrational dephasing D Barik, DS Ray The Journal of chemical physics 121 (4), 1681-1689, 2004 | 13 | 2004 |
Anomalous heat conduction in a 2d Frenkel-Kontorova lattice D Barik The European Physical Journal B 56, 229-234, 2007 | 12 | 2007 |
Potential landscapes, bifurcations, and robustness of tristable networks A Dey, D Barik ACS Synthetic Biology 10 (2), 391-401, 2021 | 11 | 2021 |