William Greenleaf
William Greenleaf
Associate Professor of Genetics, Stanford University
Verified email at - Homepage
Cited by
Cited by
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
JD Buenrostro, PG Giresi, LC Zaba, HY Chang, WJ Greenleaf
Nature methods 10 (12), 1213-1218, 2013
ATAC‐seq: a method for assaying chromatin accessibility genome‐wide
JD Buenrostro, B Wu, HY Chang, WJ Greenleaf
Current protocols in molecular biology 109 (1), 21.29. 1-21.29. 9, 2015
Single-cell chromatin accessibility reveals principles of regulatory variation
JD Buenrostro, B Wu, UM Litzenburger, D Ruff, ML Gonzales, MP Snyder, ...
Nature 523 (7561), 486-490, 2015
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
MR Corces, AE Trevino, EG Hamilton, PG Greenside, ...
Nature methods 14 (10), 959-962, 2017
Direct observation of base-pair stepping by RNA polymerase
EA Abbondanzieri, WJ Greenleaf, JW Shaevitz, R Landick, SM Block
Nature 438 (7067), 460-465, 2005
Chromatin accessibility and the regulatory epigenome
SL Klemm, Z Shipony, WJ Greenleaf
Nature Reviews Genetics 20 (4), 207-220, 2019
Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution
MR Corces, JD Buenrostro, B Wu, PG Greenside, SM Chan, JL Koenig, ...
Nature genetics 48 (10), 1193-1203, 2016
HiChIP: efficient and sensitive analysis of protein-directed genome architecture
MR Mumbach, AJ Rubin, RA Flynn, C Dai, PA Khavari, WJ Greenleaf, ...
Nature methods 13 (11), 919-922, 2016
The chromatin accessibility landscape of primary human cancers
MR Corces, JM Granja, S Shams, BH Louie, JA Seoane, W Zhou, ...
Science 362 (6413), eaav1898, 2018
chromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data
AN Schep, B Wu, JD Buenrostro, WJ Greenleaf
Nature methods 14 (10), 975-978, 2017
High-resolution, single-molecule measurements of biomolecular motion
WJ Greenleaf, MT Woodside, SM Block
Annu. Rev. Biophys. Biomol. Struct. 36, 171-190, 2007
Artificial cavitation nuclei significantly enhance acoustically induced cell transfection
WJ Greenleaf, ME Bolander, G Sarkar, MB Goldring, JF Greenleaf
Ultrasound in medicine & biology 24 (4), 587-595, 1998
Direct observation of hierarchical folding in single riboswitch aptamers
WJ Greenleaf, KL Frieda, DAN Foster, MT Woodside, SM Block
Science 319 (5863), 630-633, 2008
Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion
AT Satpathy, JM Granja, KE Yost, Y Qi, F Meschi, GP McDermott, ...
Nature biotechnology 37 (8), 925-936, 2019
Integrated single-cell analysis maps the continuous regulatory landscape of human hematopoietic differentiation
JD Buenrostro, MR Corces, CA Lareau, B Wu, AN Schep, MJ Aryee, ...
Cell 173 (6), 1535-1548. e16, 2018
Origin and differentiation of human memory CD8 T cells after vaccination
RS Akondy, M Fitch, S Edupuganti, S Yang, HT Kissick, KW Li, ...
Nature 552 (7685), 362-367, 2017
Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries
ML Carpenter, JD Buenrostro, C Valdiosera, H Schroeder, ME Allentoft, ...
The American Journal of Human Genetics 93 (5), 852-864, 2013
Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements
MR Mumbach, AT Satpathy, EA Boyle, C Dai, BG Gowen, SW Cho, ...
Nature genetics 49 (11), 1602-1612, 2017
ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis
JM Granja, MR Corces, SE Pierce, ST Bagdatli, H Choudhry, HY Chang, ...
Nature genetics 53 (3), 403-411, 2021
Structured nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions
AN Schep, JD Buenrostro, SK Denny, K Schwartz, G Sherlock, ...
Genome research 25 (11), 1757-1770, 2015
The system can't perform the operation now. Try again later.
Articles 1–20