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Jean-Baptiste Lugagne
Jean-Baptiste Lugagne
Verified email at bu.edu - Homepage
Title
Cited by
Cited by
Year
Balancing a genetic toggle switch by real-time feedback control and periodic forcing
JB Lugagne, S Sosa Carrillo, M Kirch, A Köhler, G Batt, P Hersen
Nature communications 8 (1), 1-8, 2017
1742017
DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning
JB Lugagne, H Lin, MJ Dunlop
PLoS computational biology 16 (4), e1007673, 2020
1692020
Noise propagation in synthetic gene circuits for metabolic control
DA Oyarzun, JB Lugagne, GBV Stan
ACS synthetic biology 4 (2), 116-125, 2015
832015
Microsecond fingerprint stimulated Raman spectroscopic imaging by ultrafast tuning and spatial-spectral learning
H Lin, HJ Lee, N Tague, JB Lugagne, C Zong, F Deng, J Shin, L Tian, ...
Nature communications 12 (1), 3052, 2021
802021
DeLTA 2.0: A deep learning pipeline for quantifying single-cell spatial and temporal dynamics
OM O’Connor, RN Alnahhas, JB Lugagne, MJ Dunlop
PLoS computational biology 18 (1), e1009797, 2022
492022
Extracellular vesicle production loaded with nanoparticles and drugs in a trade‐off between loading, yield and purity: towards a personalized drug delivery system
M Piffoux, AKA Silva, JB Lugagne, P Hersen, C Wilhelm, F Gazeau
Advanced biosystems 1 (5), 1700044, 2017
382017
Dynamic gene expression and growth underlie cell-to-cell heterogeneity in Escherichia coli stress response
NMV Sampaio, CM Blassick, V Andreani, JB Lugagne, MJ Dunlop
Proceedings of the National Academy of Sciences 119 (14), e2115032119, 2022
362022
Cell-machine interfaces for characterizing gene regulatory network dynamics
JB Lugagne, MJ Dunlop
Current opinion in systems biology 14, 1-8, 2019
332019
Identification of individual cells from z-stacks of bright-field microscopy images
JB Lugagne, S Jain, P Ivanovitch, Z Ben Meriem, C Vulin, C Fracassi, ...
Scientific reports 8 (1), 11455, 2018
282018
Fingerprint Spectroscopic SRS Imaging of Single Living Cells and Whole Brain by Ultrafast Tuning and Spatial-Spectral Learning
H Lin, HJ Lee, N Tague, JB Lugagne, C Zong, F Deng, W Wong, ...
arXiv preprint arXiv:2003.02224, 2020
72020
Anticipating antibiotic resistance
JB Lugagne, MJ Dunlop
Science 375 (6583), 818-819, 2022
52022
Delta: Automated cell segmentation, tracking, and lineage reconstruction using deep learning. bioRxiv 720615
JB Lugagne, H Lin, MJ Dunlop
52019
Stochastic simulation of enzymatic reactions under transcriptional feedback regulation
JB Lugagne, DA Oyarzún, GBV Stan
2013 European Control Conference (ECC), 3646-3651, 2013
52013
Deep model predictive control of gene expression in thousands of single cells
JB Lugagne, CM Blassick, MJ Dunlop
Nature Communications 15 (1), 2148, 2024
42024
Deep Neural Networks for Predicting Single-Cell Responses and Probability Landscapes
HE Klumpe, JB Lugagne, AS Khalil, MJ Dunlop
ACS Synthetic Biology 12 (8), 2367-2381, 2023
22023
Longitudinal Single‐Cell Imaging of Engineered Strains with Stimulated Raman Scattering to Characterize Heterogeneity in Fatty Acid Production
N Tague, H Lin, JB Lugagne, OM O'Connor, D Burman, WW Wong, ...
Advanced Science 10 (20), 2206519, 2023
22023
Assembly and Characterizations of Bifunctional Fluorescent and Magnetic Microneedles With One Decade Length Tunability
JB Lugagne, G Brackx, E Seyrek, S Nowak, Y Sivry, L Vitorazi, JF Berret, ...
Advanced Functional Materials 27 (31), 1700362, 2017
22017
Real-time control of a genetic toggle switch
JB Lugagne
Université Sorbonne Paris Cité, 2016
22016
Longitudinal single-cell chemical imaging of engineered strains reveals heterogeneity in fatty acid production
N Tague, H Lin, JB Lugagne, OM O’Connor, D Burman, WW Wong, ...
bioRxiv, 2022
2022
Chemical imaging of free fatty acid production heterogeneity in live microbes by stimulated Raman scattering
H Lin, N Tague, JB Lugagne, D Burman, WW Wong, MJ Dunlop, ...
Advanced Chemical Microscopy for Life Science and Translational Medicine …, 2022
2022
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