Roman Volodymyr Briskine
Roman Volodymyr Briskine
Science IT Consultant, Universität Zürich
Verified email at uzh.ch
TitleCited byYear
Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula
A Branca, TD Paape, P Zhou, R Briskine, AD Farmer, J Mudge, AK Bharti, ...
Proceedings of the National Academy of Sciences 108 (42), E864-E870, 2011
1942011
Epigenetic and genetic influences on DNA methylation variation in maize populations
SR Eichten, R Briskine, J Song, Q Li, R Swanson-Wagner, PJ Hermanson, ...
The Plant Cell 25 (8), 2783-2797, 2013
1612013
Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays
RS Sekhon, R Briskine, CN Hirsch, CL Myers, NM Springer, CR Buell, ...
PloS one 8 (4), e61005, 2013
1342013
Genomic signature of adaptation to climate in Medicago truncatula
JB Yoder, J Stanton-Geddes, P Zhou, R Briskine, ND Young, P Tiffin
Genetics 196 (4), 1263-1275, 2014
1212014
Candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome, sequence-based association genetics in Medicago truncatula
J Stanton-Geddes, T Paape, B Epstein, R Briskine, J Yoder, J Mudge, ...
PLoS ONE 8 (5), e65688, 2013
1172013
Reshaping of the maize transcriptome by domestication
R Swanson-Wagner, R Briskine, R Schaefer, MB Hufford, J Ross-Ibarra, ...
Proceedings of the National Academy of Sciences 109 (29), 11878-11883, 2012
1092012
Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae
B Epstein, A Branca, J Mudge, AK Bharti, R Briskine, AD Farmer, ...
PLoS Genet 8 (8), e1002868-e1002868, 2012
682012
Genomic distribution of maize facultative heterochromatin marked by trimethylation of H3K27
I Makarevitch, SR Eichten, R Briskine, AJ Waters, ON Danilevskaya, ...
The Plant Cell 25 (3), 780-793, 2013
652013
Fine-scale population recombination rates, hotspots, and correlates of recombination in the Medicago truncatula genome
T Paape, P Zhou, A Branca, R Briskine, N Young, P Tiffin
Genome biology and evolution 4 (5), 726-737, 2012
642012
Phylogenetic signal variation in the genomes of Medicago (Fabaceae)
JB Yoder, R Briskine, J Mudge, A Farmer, T Paape, K Steele, GD Weiblen, ...
Systematic biology 62 (3), 424-438, 2013
532013
High‐density genome‐wide association mapping implicates an F‐box encoding gene in Medicago truncatula resistance to Aphanomyces euteiches
M Bonhomme, O André, Y Badis, J Ronfort, C Burgarella, N Chantret, ...
New Phytologist 201 (4), 1328-1342, 2014
492014
Selection, genome‐wide fitness effects and evolutionary rates in the model legume Medicago truncatula
T Paape, T Bataillon, P Zhou, T JY Kono, R Briskine, ND Young, P Tiffin
Molecular ecology 22 (13), 3525-3538, 2013
452013
The Cardamine hirsuta genome offers insight into the evolution of morphological diversity
X Gan, A Hay, M Kwantes, G Haberer, A Hallab, RD Ioio, H Hofhuis, ...
Nature Plants 2, 16167, 2016
442016
Genome assembly and annotation of Arabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology
RV Briskine, T Paape, R Shimizu‐Inatsugi, T Nishiyama, S Akama, J Sese, ...
Molecular Ecology Resources, 2016
372016
Estimating heritability using genomic data
J Stanton‐Geddes, JB Yoder, R Briskine, ND Young, P Tiffin
Methods in Ecology and Evolution 4 (12), 1151-1158, 2013
342013
Discovering functional modules across diverse maize transcriptomes using COB, the co-expression browser
RJ Schaefer, R Briskine, NM Springer, CL Myers
PLoS ONE 9 (6), e99193, 2014
242014
Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias
L Li, R Briskine, R Schaefer, PS Schnable, CL Myers, LE Flagel, ...
BMC Genomics 17 (1), 875, 2016
142016
Patterns of polymorphism and selection in the subgenomes of the allopolyploid Arabidopsis kamchatica
T Paape, RV Briskine, G Halstead-Nussloch, HEL Lischer, ...
Nature communications 9 (1), 3909, 2018
112018
Positional bias in variant calls against draft reference assemblies
RV Briskine, KK Shimizu
BMC Genomics 18 (1), 263, 2017
52017
Patterns of polymorphism, selection and linkage disequilibrium in the subgenomes of the allopolyploid Arabidopsis kamchatica
T Paape, RV Briskine, HEL Lischer, G Halstead-Nussloch, ...
bioRxiv, 248195, 2018
22018
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