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Carsen Stringer
Carsen Stringer
Group Leader, HHMI Janelia Research Campus
Verified email at janelia.hhmi.org - Homepage
Title
Cited by
Cited by
Year
Spontaneous behaviors drive multidimensional, brainwide activity
C Stringer, M Pachitariu, N Steinmetz, CB Reddy, M Carandini, KD Harris
Science 364 (6437), 255, 2019
723*2019
Cellpose: a generalist algorithm for cellular segmentation
C Stringer, T Wang, M Michaelos, M Pachitariu
Nature methods 18 (1), 100-106, 2021
5072021
Suite2p: beyond 10,000 neurons with standard two-photon microscopy
M Pachitariu, C Stringer, M Dipoppa, S Schröder, LF Rossi, H Dalgleish, ...
BioRxiv, 061507, 2017
4322017
High-dimensional geometry of population responses in visual cortex
C Stringer, M Pachitariu, N Steinmetz, M Carandini, KD Harris
Nature, 1, 2019
2942019
Robustness of spike deconvolution for neuronal calcium imaging
M Pachitariu, C Stringer, KD Harris
Journal of Neuroscience 38 (37), 7976-7985, 2018
125*2018
Inhibitory control of correlated intrinsic variability in cortical networks
C Stringer, M Pachitariu, NA Steinmetz, M Okun, P Bartho, KD Harris, ...
Elife 5, e19695, 2016
912016
Simultaneous computation of dynamical and equilibrium information using a weighted ensemble of trajectories
E Suarez, S Lettieri, MC Zwier, CA Stringer, SR Subramanian, LT Chong, ...
Journal of chemical theory and computation 10 (7), 2658-2667, 2014
842014
Computational processing of neural recordings from calcium imaging data
C Stringer, M Pachitariu
Current opinion in neurobiology 55, 22-31, 2019
712019
High-precision coding in visual cortex
C Stringer, M Michaelos, D Tsyboulski, SE Lindo, M Pachitariu
Cell 184 (10), 2767-2778. e15, 2021
682021
Neuromatch Academy: Teaching computational neuroscience with global accessibility
T van Viegen, A Akrami, K Bonnen, E DeWitt, A Hyafil, H Ledmyr, ...
Trends in cognitive sciences 25 (7), 535-538, 2021
142021
The importance of accounting for movement when relating neuronal activity to sensory and cognitive processes
E Zagha, JC Erlich, S Lee, G Lur, DH O'Connor, NA Steinmetz, C Stringer, ...
Journal of Neuroscience 42 (8), 1375-1382, 2022
102022
Omnipose: a high-precision morphology-independent solution for bacterial cell segmentation
KJ Cutler, C Stringer, PA Wiggins, JD Mougous
bioRxiv, 2021
72021
Cellpose 2.0: how to train your own model
C Stringer, M Pachitariu
bioRxiv, 2022
62022
Recordings of ten thousand neurons in visual cortex during spontaneous behaviors
C Stringer, M Pachitariu, C Reddy, M Carandini, KD Harris
Recordings of ten thousand neurons in visual cortex during spontaneous behaviors, 2018
52018
Recordings of 10,000 neurons in visual cortex in response to 2,800 natural images
C Stringer, M Pachitariu, M Carandini, K Harris
Figshare Repos, 2018
42018
Facemap. 2020
C Stringer
URL: https://github. com/MouseLand/facemap, 8, 0
2
Discovering structure in multi-neuron recordings through network modelling
C Stringer
UCL (University College London), 2018
12018
Not so spontaneous: Multi-dimensional representations of behaviors and context in sensory areas
L Avitan, C Stringer
Neuron, 2022
2022
Neuromatch Academy: a 3-week, online summer school in computational neuroscience
B Hart, T Achakulvisut, A Adeyemi, A Akrami, B Alicea, A Alonso-Andres, ...
Journal of Open Source Education 5 (49), 2022
2022
Passive Dynamic Walking Analysis
C Stringer
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Articles 1–20