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Vanja Haberle
Vanja Haberle
IMP - Research Institute for Molecular Pathology, Vienna
Verified email at imp.ac.at
Title
Cited by
Cited by
Year
A promoter-level mammalian expression atlas
Nature 507 (7493), 462-470, 2014
17292014
Eukaryotic core promoters and the functional basis of transcription initiation
V Haberle, A Stark
Nature reviews Molecular cell biology 19 (10), 621-637, 2018
7182018
Epigenetic reprogramming enables the transition from primordial germ cell to gonocyte
PWS Hill, HG Leitch, CE Requena, Z Sun, R Amouroux, M Roman-Trufero, ...
Nature 555 (7696), 392-396, 2018
2312018
CAGEr: precise TSS data retrieval and high-resolution promoterome mining for integrative analyses
V Haberle, ARR Forrest, Y Hayashizaki, P Carninci, B Lenhard
Nucleic acids research 43 (8), e51-e51, 2015
2272015
Two independent transcription initiation codes overlap on vertebrate core promoters
V Haberle, N Li, Y Hadzhiev, C Plessy, C Previti, C Nepal, J Gehrig, ...
Nature 507 (7492), 381-385, 2014
1982014
Resolving systematic errors in widely used enhancer activity assays in human cells
F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, MA Zabidi, ...
Nature methods 15 (2), 141-149, 2018
1682018
Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis
C Nepal, Y Hadzhiev, C Previti, V Haberle, N Li, H Takahashi, ...
Genome research 23 (11), 1938-1950, 2013
1322013
The aurora B kinase and the polycomb protein ring1B combine to regulate active promoters in quiescent lymphocytes
A Frangini, M Sj÷berg, M Roman-Trufero, G Dharmalingam, V Haberle, ...
Molecular cell 51 (5), 647-661, 2013
1272013
Transcriptional cofactors display specificity for distinct types of core promoters
V Haberle, CD Arnold, M Pagani, M Rath, K Schernhuber, A Stark
Nature 570 (7759), 122-126, 2019
1142019
Promoter architectures and developmental gene regulation
V Haberle, B Lenhard
Seminars in cell & developmental biology 57, 11-23, 2016
772016
Genome-wide DNA methylation profiling of non-small cell lung carcinomas
RH Carvalho, V Haberle, J Hou, T van Gent, S Thongjuea, W van IJcken, ...
Epigenetics & chromatin 5, 1-18, 2012
742012
Differential cofactor dependencies define distinct types of human enhancers
C Neumayr, V Haberle, L Serebreni, K Karner, O Hendy, A Boija, ...
Nature 606 (7913), 406-413, 2022
602022
Genomewide DNA methylation analysis identifies novel methylated genes in non–small-cell lung carcinomas
RH Carvalho, J Hou, V Haberle, J Aerts, F Grosveld, B Lenhard, ...
Journal of Thoracic Oncology 8 (5), 562-573, 2013
322013
Dissecting genomic regulatory elements in vivo
V Haberle, B Lenhard
Nature biotechnology 30 (6), 504-506, 2012
122012
Functionally distinct promoter classes initiate transcription via different mechanisms reflected in focused versus dispersed initiation patterns
L Serebreni, LM Pleyer, V Haberle, O Hendy, A Vlasova, V Loubiere, ...
The EMBO Journal 42 (10), e113519, 2023
82023
Resolving systematic errors in widely-used enhancer activity assays in human cells enables genome-wide functional enhancer characterization
F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, MA Zabidi, ...
BiorXiv, 164590, 2017
32017
STARR-seq screening protocol
A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...
12017
qPCR based reporter assay on luciferase transcripts
A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...
12017
qPCR assay to measure ISG expression in human cells
A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...
12017
STARR-seq library preparation
A Stark, F Muerdter, ŁM Boryń, AR Woodfin, C Neumayr, M Rath, ...
12017
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