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Hyunseung Yoo
Hyunseung Yoo
Microsoft Azure HPC+AI
Verified email at microsoft.com - Homepage
Title
Cited by
Cited by
Year
Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center
AR Wattam, JJ Davis, R Assaf, S Boisvert, T Brettin, C Bun, N Conrad, ...
Nucleic acids research 45 (D1), D535-D542, 2017
14652017
PATRIC, the bacterial bioinformatics database and analysis resource
AR Wattam, D Abraham, O Dalay, TL Disz, T Driscoll, JL Gabbard, ...
Nucleic acids research 42 (D1), D581-D591, 2014
13332014
KBase: the United States department of energy systems biology knowledgebase
AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ...
Nature biotechnology 36 (7), 566-569, 2018
10812018
The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58
DW Wood, JC Setubal, R Kaul, DE Monks, JP Kitajima, VK Okura, Y Zhou, ...
science 294 (5550), 2317-2323, 2001
9852001
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
JJ Davis, AR Wattam, RK Aziz, T Brettin, R Butler, RM Butler, P Chlenski, ...
Nucleic acids research 48 (D1), D606-D612, 2020
8192020
PATRIC: the comprehensive bacterial bioinformatics resource with a focus on human pathogenic species
JJ Gillespie, AR Wattam, SA Cammer, JL Gabbard, MP Shukla, O Dalay, ...
Infection and immunity 79 (11), 4286-4298, 2011
3352011
Introducing the bacterial and viral bioinformatics resource center (BV-BRC): a resource combining PATRIC, IRD and ViPR
RD Olson, R Assaf, T Brettin, N Conrad, C Cucinell, JJ Davis, ...
Nucleic acids research 51 (D1), D678-D689, 2023
2492023
Developing an in silico minimum inhibitory concentration panel test for Klebsiella pneumoniae
M Nguyen, T Brettin, SW Long, JM Musser, RJ Olsen, R Olson, M Shukla, ...
Scientific reports 8 (1), 421, 2018
1642018
PATtyFams: protein families for the microbial genomes in the PATRIC database
JJ Davis, S Gerdes, GJ Olsen, R Olson, GD Pusch, M Shukla, V Vonstein, ...
Frontiers in microbiology 7, 118, 2016
1632016
Analysis of Ten Brucella Genomes Reveals Evidence for Horizontal Gene Transfer Despite a Preferred Intracellular Lifestyle
AR Wattam, KP Williams, EE Snyder, NF Almeida Jr, M Shukla, ...
Journal of bacteriology 191 (11), 3569-3579, 2009
1592009
PATRIC: the VBI pathosystems resource integration center
EE Snyder, N Kampanya, J Lu, EK Nordberg, HR Karur, M Shukla, ...
Nucleic acids research 35 (suppl_1), D401-D406, 2007
1492007
Converting tabular data into images for deep learning with convolutional neural networks
Y Zhu, T Brettin, F Xia, A Partin, M Shukla, H Yoo, YA Evrard, ...
Scientific reports 11 (1), 11325, 2021
1212021
PATRIC as a unique resource for studying antimicrobial resistance
DA Antonopoulos, R Assaf, RK Aziz, T Brettin, C Bun, N Conrad, JJ Davis, ...
Briefings in bioinformatics 20 (4), 1094-1102, 2019
1032019
Assembly, annotation, and comparative genomics in PATRIC, the all bacterial bioinformatics resource center
AR Wattam, T Brettin, JJ Davis, S Gerdes, R Kenyon, D Machi, C Mao, ...
Comparative genomics: Methods and protocols, 79-101, 2018
912018
Curation, integration and visualization of bacterial virulence factors in PATRIC
C Mao, D Abraham, AR Wattam, MJC Wilson, M Shukla, HS Yoo, ...
Bioinformatics 31 (2), 252-258, 2015
742015
A cross-study analysis of drug response prediction in cancer cell lines
F Xia, J Allen, P Balaprakash, T Brettin, C Garcia-Cardona, A Clyde, ...
Briefings in bioinformatics 23 (1), bbab356, 2022
452022
Ensemble transfer learning for the prediction of anti-cancer drug response
Y Zhu, T Brettin, YA Evrard, A Partin, F Xia, M Shukla, H Yoo, ...
Scientific reports 10 (1), 18040, 2020
452020
Bridging data center AI systems with edge computing for actionable information retrieval
Z Liu, A Ali, P Kenesei, A Miceli, H Sharma, N Schwarz, D Trujillo, H Yoo, ...
2021 3rd Annual Workshop on Extreme-scale Experiment-in-the-Loop Computing …, 2021
232021
Developing anin silicominimum inhibitory concentration panel test forKlebsiella pneumoniae
M Nguyen, T Brettin, SW Long, RJ Olsen, JM Musser, R Olson, M Shukla, ...
202017
A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes
M VanOeffelen, M Nguyen, D Aytan-Aktug, T Brettin, EM Dietrich, ...
Briefings in Bioinformatics 22 (6), bbab313, 2021
182021
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