| Parallel reaction monitoring for high resolution and high mass accuracy quantitative, targeted proteomics AC Peterson, JD Russell, DJ Bailey, MS Westphall, JJ Coon Molecular & cellular proteomics 11 (11), 1475-1488, 2012 | 1337 | 2012 |
| Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome AS Hebert, KE Dittenhafer-Reed, W Yu, DJ Bailey, ES Selen, ... Molecular cell 49 (1), 186-199, 2013 | 703 | 2013 |
| The one hour yeast proteome AS Hebert, AL Richards, DJ Bailey, A Ulbrich, EE Coughlin, MS Westphall, ... Molecular & Cellular Proteomics 13 (1), 339-347, 2014 | 641 | 2014 |
| Proteomic and phosphoproteomic comparison of human ES and iPS cells DH Phanstiel, J Brumbaugh, CD Wenger, S Tian, MD Probasco, DJ Bailey, ... Nature methods 8 (10), 821-827, 2011 | 317 | 2011 |
| Comprehensive single-shot proteomics with FAIMS on a hybrid orbitrap mass spectrometer AS Hebert, S Prasad, MW Belford, DJ Bailey, GC McAlister, SE Abbatiello, ... Analytical Chemistry 90 (15), 9529-9537, 2018 | 280 | 2018 |
| Building ProteomeTools based on a complete synthetic human proteome DP Zolg, M Wilhelm, K Schnatbaum, J Zerweck, T Knaute, B Delanghe, ... Nature methods 14 (3), 259-262, 2017 | 262 | 2017 |
| Full-featured, real-time database searching platform enables fast and accurate multiplexed quantitative proteomics DK Schweppe, JK Eng, Q Yu, D Bailey, R Rad, J Navarrete-Perea, ... Journal of proteome research 19 (5), 2026-2034, 2020 | 255 | 2020 |
| Neutron-encoded mass signatures for multiplexed proteome quantification AS Hebert, AE Merrill, DJ Bailey, AJ Still, MS Westphall, ER Strieter, ... Nature methods 10 (4), 332-334, 2013 | 205 | 2013 |
| Characterization and optimization of multiplexed quantitative analyses using high-field asymmetric-waveform ion mobility mass spectrometry DK Schweppe, S Prasad, MW Belford, J Navarrete-Perea, DJ Bailey, ... Analytical chemistry 91 (6), 4010-4016, 2019 | 199 | 2019 |
| COMPASS: A suite of pre‐and post‐search proteomics software tools for OMSSA CD Wenger, DH Phanstiel, MV Lee, DJ Bailey, JJ Coon Proteomics 11 (6), 1064-1074, 2011 | 188 | 2011 |
| A quantitative map of the liver mitochondrial phosphoproteome reveals posttranslational control of ketogenesis PA Grimsrud, JJ Carson, AS Hebert, SL Hubler, NM Niemi, DJ Bailey, ... Cell metabolism 16 (5), 672-683, 2012 | 184 | 2012 |
| One-hour proteome analysis in yeast AL Richards, AS Hebert, A Ulbrich, DJ Bailey, EE Coughlin, MS Westphall, ... Nature protocols 10 (5), 701-714, 2015 | 141 | 2015 |
| A novel differential ion mobility device expands the depth of proteome coverage and the sensitivity of multiplex proteomic measurements S Pfammatter, E Bonneil, FP McManus, S Prasad, DJ Bailey, M Belford, ... Molecular & Cellular Proteomics 17 (10), 2051-2067, 2018 | 132 | 2018 |
| NeuCode labels for relative protein quantification AE Merrill, AS Hebert, ME MacGilvray, CM Rose, DJ Bailey, JC Bradley, ... Molecular & cellular proteomics 13 (9), 2503-2512, 2014 | 129 | 2014 |
| Rapid phosphoproteomic and transcriptomic changes in the rhizobia-legume symbiosis CM Rose, M Venkateshwaran, JD Volkening, PA Grimsrud, J Maeda, ... Molecular & Cellular Proteomics 11 (9), 724-744, 2012 | 124 | 2012 |
| The negative mode proteome with activated ion negative electron transfer dissociation (AI-NETD) NM Riley, RM JP, CM Rose, AL Richards, NW Kwiecien, DJ Bailey, ... Molecular & Cellular Proteomics 14 (10), 2644-2660, 2015 | 71 | 2015 |
| Amine-reactive neutron-encoded labels for highly plexed proteomic quantitation AS Hebert, AE Merrill, JA Stefely, DJ Bailey, CD Wenger, MS Westphall, ... Molecular & Cellular Proteomics 12 (11), 3360-3369, 2013 | 71 | 2013 |
| Statin cost-effectiveness in the United States for people at different vascular risk levels Heart Protection Study Collaborative Group Circulation: Cardiovascular Quality and Outcomes 2 (2), 65-72, 2009 | 71 | 2009 |
| Benchmarking the orbitrap tribrid eclipse for next generation multiplexed proteomics Q Yu, JA Paulo, J Naverrete-Perea, GC McAlister, JD Canterbury, ... Analytical chemistry 92 (9), 6478-6485, 2020 | 70 | 2020 |
| Instant spectral assignment for advanced decision tree-driven mass spectrometry DJ Bailey, CM Rose, GC McAlister, J Brumbaugh, P Yu, CD Wenger, ... Proceedings of the National Academy of Sciences 109 (22), 8411-8416, 2012 | 64 | 2012 |
