Follow
Özcan C. Esen
Özcan C. Esen
Verified email at uchicago.edu
Title
Cited by
Cited by
Year
Anvi’o: an advanced analysis and visualization platform for ‘omics data
AM Eren, ÖC Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ...
PeerJ 3, e1319, 2015
1513*2015
Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
TO Delmont, C Quince, A Shaiber, ÖC Esen, STM Lee, MS Rappé, ...
Nature microbiology 3 (7), 804-813, 2018
4772018
Community-led, integrated, reproducible multi-omics with anvi’o
AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ...
Nature microbiology 6 (1), 3-6, 2021
4212021
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
A Shaiber, AD Willis, TO Delmont, S Roux, LX Chen, AC Schmid, ...
Genome biology 21, 1-35, 2020
1422020
Tracking microbial colonization in fecal microbiota transplantation experiments via genome-resolved metagenomics
STM Lee, SA Kahn, TO Delmont, A Shaiber, ÖC Esen, NA Hubert, ...
Microbiome 5, 1-10, 2017
862017
Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics
TO Delmont, AM Eren, L Maccario, E Prestat, ÖC Esen, E Pelletier, ...
Frontiers in microbiology 6, 358, 2015
842015
Community-led, integrated, reproducible multi-omics with anvi’o. Nat Microbiol 6: 3–6
AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ...
722021
The Wolbachia mobilome in Culex pipiens includes a putative plasmid
J Reveillaud, SR Bordenstein, C Cruaud, A Shaiber, ÖC Esen, M Weill, ...
Nature communications 10 (1), 1051, 2019
432019
Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes. Nat Microbiol 3: 804–813
TO Delmont, C Quince, A Shaiber, ÖC Esen, ST Lee, MS Rappé, ...
422018
FORENSIC: an online platform for fecal source identification
A Roguet, ÖC Esen, AM Eren, RJ Newton, SL McLellan
Msystems 5 (2), 10.1128/msystems. 00869-19, 2020
152020
Genome-resolved insights into a novel Spiroplasma symbiont of the Wheat Stem Sawfly (Cephus cinctus)
CJ Yeoman, LM Brutscher, ÖC Esen, F Ibaoglu, C Fowler, AM Eren, ...
PeerJ 7, e7548, 2019
142019
pyani v0. 2.8: average nucleotide identity (ANI) and related measures for whole genome comparisons
L Pritchard, P Cock, Ö Esen
142019
Author Correction: Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
TO Delmont, C Quince, A Shaiber, ÖC Esen, STM Lee, MS Rappé, ...
Nature Microbiology 3 (8), 963-963, 2018
102018
The global biogeography of amino acid variants within a single SAR11 population is governed by natural selection
TO Delmont, E Kiefl, O Kilinc, ÖC Esen, I Uysal, MS Rappé, S Giovannoni, ...
bioRxiv, 170639, 2017
72017
FORENSIC: an online platform for fecal source identification. mSystems 5: e00869-19
A Roguet, ÖC Esen, AM Eren, RJ Newton, SL McLellan
22020
FORENSIC: an Online Platform for Fecal Source Identification
R Adélaïde, ÖC Esen, EA Murat, RJ Newton, SL McLellan
MSystems, 2020
2020
Pyani: Whole-genome classification using Average Nucleotide Identity
L Pritchard, B Harrington, P Cock, R Davey, N Waters, B Brankovics, ...
2015
The system can't perform the operation now. Try again later.
Articles 1–17