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zcan C. Esen
zcan C. Esen
Verified email at uchicago.edu
Title
Cited by
Cited by
Year
Anvi’o: an advanced analysis and visualization platform for ‘omics data
AM Eren, C Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ...
PeerJ 3, e1319, 2015
1300*2015
Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
TO Delmont, C Quince, A Shaiber, C Esen, STM Lee, MS Rapp, ...
Nature microbiology 3 (7), 804-813, 2018
4172018
Community-led, integrated, reproducible multi-omics with anvi’o
AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ...
Nature microbiology 6 (1), 3-6, 2021
2332021
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
A Shaiber, AD Willis, TO Delmont, S Roux, LX Chen, AC Schmid, ...
Genome biology 21 (1), 1-35, 2020
932020
Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics
TO Delmont, AM Eren, L Maccario, E Prestat, C Esen, E Pelletier, ...
Frontiers in microbiology 6, 358, 2015
812015
Tracking microbial colonization in fecal microbiota transplantation experiments via genome-resolved metagenomics
STM Lee, SA Kahn, TO Delmont, A Shaiber, C Esen, NA Hubert, ...
Microbiome 5, 1-10, 2017
802017
Community-led, integrated, reproducible multi-omics with anvi’o. Nat Microbiol 6: 3–6
AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ...
392021
The Wolbachia mobilome in Culex pipiens includes a putative plasmid
J Reveillaud, SR Bordenstein, C Cruaud, A Shaiber, C Esen, M Weill, ...
Nature communications 10 (1), 1051, 2019
372019
Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes. Nat Microbiol 3: 804–813
TO Delmont, C Quince, A Shaiber, C Esen, ST Lee, MS Rapp, ...
352018
FORENSIC: an online platform for fecal source identification
A Roguet, C Esen, AM Eren, RJ Newton, SL McLellan
Msystems 5 (2), e00869-19, 2020
142020
Genome-resolved insights into a novel Spiroplasma symbiont of the Wheat Stem Sawfly (Cephus cinctus)
CJ Yeoman, LM Brutscher, C Esen, F Ibaoglu, C Fowler, AM Eren, ...
PeerJ 7, e7548, 2019
112019
pyani v0. 2.8: average nucleotide identity (ANI) and related measures for whole genome comparisons
L Pritchard, P Cock, Esen
72019
Author Correction: Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
TO Delmont, C Quince, A Shaiber, C Esen, STM Lee, MS Rapp, ...
Nature Microbiology 3 (8), 963-963, 2018
72018
The global biogeography of amino acid variants within a single SAR11 population is governed by natural selection
TO Delmont, E Kiefl, O Kilinc, C Esen, I Uysal, MS Rapp, S Giovannoni, ...
bioRxiv, 170639, 2017
72017
FORENSIC: an online platform for fecal source identification. mSystems 5: e00869-19
A Roguet, C Esen, AM Eren, RJ Newton, SL McLellan
22020
FORENSIC: an Online Platform for Fecal Source Identification
R Adlade, C Esen, EA Murat, RJ Newton, SL McLellan
MSystems, 2020
2020
Pyani: Whole-genome classification using Average Nucleotide Identity
L Pritchard, B Harrington, P Cock, R Davey, N Waters, B Brankovics, ...
2015
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Articles 1–17