| Protein alignment algorithms with an efficient backtracking routine on multiple GPUs J Blazewicz, W Frohmberg, M Kierzynka, E Pesch, P Wojciechowski BMC bioinformatics 12 (1), 1-17, 2011 | 74 | 2011 |
| G-MSA—A GPU-based, fast and accurate algorithm for multiple sequence alignment J Blazewicz, W Frohmberg, M Kierzynka, P Wojciechowski Journal of Parallel and Distributed Computing 73 (1), 32-41, 2013 | 50 | 2013 |
| Identification of altered developmental pathways in human juvenile HD iPSC with 71Q and 109Q using transcriptome profiling K Świtońska, WJ Szlachcic, L Handschuh, P Wojciechowski, Ł Marczak, ... Frontiers in Cellular Neuroscience 12, 528, 2019 | 22 | 2019 |
| G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads W Frohmberg, M Kierzynka, J Blazewicz, P Gawron, P Wojciechowski Bulletin of the Polish Academy of Sciences. Technical Sciences 61 (4), 2013 | 18 | 2013 |
| AthCNV: a map of DNA copy number variations in the Arabidopsis genome A Zmienko, M Marszalek-Zenczak, P Wojciechowski, A Samelak-Czajka, ... The Plant Cell 32 (6), 1797-1819, 2020 | 17 | 2020 |
| NPM1 alternative transcripts are upregulated in acute myeloid and lymphoblastic leukemia and their expression level affects patient outcome L Handschuh, P Wojciechowski, M Kazmierczak, ... Journal of translational medicine 16 (1), 1-16, 2018 | 17 | 2018 |
| Graph algorithms for DNA sequencing–origins, current models and the future J Blazewicz, M Kasprzak, M Kierzynka, W Frohmberg, A Swiercz, ... European Journal of Operational Research 264 (3), 799-812, 2018 | 14 | 2018 |
| Simultaneous detection of mutations and copy number variation of NPM1 in the acute myeloid leukemia using multiplex ligation-dependent probe amplification M Marcinkowska-Swojak, L Handschuh, P Wojciechowski, M Goralski, ... Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 786, 14-26, 2016 | 14 | 2016 |
| Some remarks on evaluating the quality of the multiple sequence alignment based on the BAliBASE benchmark J Blazewicz, P Formanowicz, P Wojciechowski International Journal of Applied Mathematics and Computer Science 19 (4), 675, 2009 | 11 | 2009 |
| Translational and structural analysis of the shortest legume ENOD40 gene in Lupinus luteus. J Podkowinski, A Zmienko, B Florek, P Wojciechowski, A Rybarczyk, ... Acta Biochimica Polonica 56 (1), 2009 | 9 | 2009 |
| DNA sequence assembly involving an acyclic graph model J Blazewicz, W Frohmberg, P Gawron, M Kasprzak, M Kierzynka, ... Foundations of Computing and Decision Sciences 38 (1), 25-34, 2013 | 8 | 2013 |
| GRASShopPER—An algorithm for de novo assembly based on GPU alignments A Swiercz, W Frohmberg, M Kierzynka, P Wojciechowski, P Zurkowski, ... PloS one 13 (8), e0202355, 2018 | 7 | 2018 |
| G-MAPSEQ—a new method for mapping reads to a reference genome P Wojciechowski, W Frohmberg, M Kierzynka, P Zurkowski, J Blazewicz Foundations of Computing and Decision Sciences 41 (2), 123-142, 2016 | 7 | 2016 |
| GeVaDSs–decision support system for novel Genetic Vaccine development process J Blazewicz, M Borowski, W Chaara, P Kedziora, D Klatzmann, ... BMC bioinformatics 13 (1), 1-16, 2012 | 7 | 2012 |
| G-PAS 2.0–an improved version of protein alignment tool with an efficient backtracking routine on multiple GPUs W Frohmberg, M Kierzynka, J Blazewicz, P Wojciechowski Bulletin of the Polish Academy of Sciences: Technical Sciences, 491-494-491-494, 2012 | 7 | 2012 |
| Reference Alignment Based Methods for Quality Evaluation of Multiple Sequence Alignment-A Survey P Wojciechowski, P Formanowicz, J Blazewicz Current Bioinformatics 9 (1), 44-56, 2014 | 2 | 2014 |
| Parallel algorithms for evolutionary history reconstruction J Błażewicz, P Formanowicz, P Kędziora, P Wojciechowski International Conference on Parallel Processing and Applied Mathematics …, 2003 | 2 | 2003 |
| Genome-scale de novo assembly using ALGA S Swat, A Laskowski, J Badura, W Frohmberg, P Wojciechowski, ... Bioinformatics 37 (12), 1644-1651, 2021 | 1 | 2021 |
| G-DNA–a highly efficient multi-GPU/MPI tool for aligning nucleotide reads P Gawron, W Frohmberg, M Kierzynka, J Blazewicz, P Wojciechowski Bulletin of the Polish Academy of Sciences. Technical Sciences, 2014 | | 2014 |
| G-MSA-a powerful GPU-based tool for multiple sequence alignment W Frohmberg, M Kierzynka, J Błażewicz, P Wojciechowski | | |
