Riccardo Dondi

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Citations	1773	587
h-index	22	13
i10-index	54	19

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Gianluca Della VedovaUniversità degli Studi di Milano-BicoccaVerified email at dellavedova.org
Giancarlo MauriProfessor emeritus of Computer Science - University of Milano-BicoccaVerified email at unimib.it
Italo ZoppisDipartimento di Informatica, Sistemistica e Comunicazione, Università degli Studi di Milano-BicoccaVerified email at unimib.it
Yuri PirolaAssociate professor at DISCo, Univ. of Milano-BicoccaVerified email at unimib.it
Guillaume FertinNantes Université, LS2N, FranceVerified email at univ-nantes.fr
Florian SikoraLAMSADE, Université Paris-DauphineVerified email at dauphine.fr
Stéphane VialetteLIGM, Univ Gustave Eiffel, CNRS, F-77454 Marne-la-Vallée, FranceVerified email at univ-eiffel.fr
Stefano BerettaSan Raffaele Telethon Institute for Gene TherapyVerified email at hsr.it
Gunnar W. KlauHeinrich Heine University DüsseldorfVerified email at hhu.de
Nadia PisantiUniversity of Pisa & Erable Team INRIAVerified email at di.unipi.it
Mauro CastelliFull Professor at NOVA IMS, Universidade Nova de LisboaVerified email at novaims.unl.pt
Simone ZaccariaGroup Leader, University College London, Cancer InstituteVerified email at ucl.ac.uk
Flavio De PaoliUniversità di Milano-BicoccaVerified email at disco.unimib.it
Eduardo SontagNortheastern University ECE and BioEVerified email at northeastern.edu
Bhaskar DasGuptaProfessor of Computer Science, University of Illinois at ChicagoVerified email at uic.edu
Alessandra AgostiniAssociate Professor of Computer Science, University of Milano-BicoccaVerified email at unimib.it
Raffaella RizziRicercatore confermato in Informatica, Università degli Studi di Milano-BicoccaVerified email at disco.unimib.it
Tao JiangUC RiversideVerified email at cs.ucr.edu
Reka AlbertEvan Pugh University Professor, Penn StateVerified email at psu.edu
Guillaume BlinFull Professor of Computer Science, Université de Bordeaux, FranceVerified email at labri.fr

Riccardo Dondi

Università degli studi di Bergamo

Verified email at unibg.it - Homepage

Algorithms Bioinformatics


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The haplotyping problem: an overview of computational models and solutions P Bonizzoni, G Della Vedova, R Dondi, J Li Journal of Computer Science and Technology 18, 675-688, 2003	158	2003
Reconciling a gene tree to a species tree under the duplication cost model P Bonizzoni, GD Vedova, R Dondi Theoretical computer science 347 (1), 36-53, 2005	99	2005
Stimulating knowledge discovery and sharing A Agostini, S Albolino, G De Michelis, F De Paoli, R Dondi Proceedings of the 2003 ACM International Conference on Supporting Group …, 2003	88	2003
A novel method for signal transduction network inference from indirect experimental evidence R Albert, B DasGupta, R Dondi, S Kachalo, E Sontag, A Zelikovsky, ... Journal of Computational Biology 14 (7), 927-949, 2007	67	2007
HapCol: accurate and memory-efficient haplotype assembly from long reads Y Pirola, S Zaccaria, R Dondi, GW Klau, N Pisanti, P Bonizzoni Bioinformatics 32 (11), 1610-1617, 2016	58	2016
Kernel methods: support vector machines I Zoppis, G Mauri, R Dondi Encyclopedia of Bioinformatics and Computational Biology: ABC of …, 2019	52	2019
On the approximation of correlation clustering and consensus clustering P Bonizzoni, G Della Vedova, R Dondi, T Jiang Journal of Computer and System Sciences 74 (5), 671-696, 2008	44	2008
Exemplar longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, G Fertin, R Rizzi, S Vialette IEEE/ACM Transactions on Computational Biology and Bioinformatics 4 (4), 535-543, 2007	43	2007
On the minimum error correction problem for haplotype assembly in diploid and polyploid genomes P Bonizzoni, R Dondi, GW Klau, Y Pirola, N Pisanti, S Zaccaria Journal of Computational Biology 23 (9), 718-736, 2016	40	2016
The link between orthology relations and gene trees: a correction perspective M Lafond, R Dondi, N El-Mabrouk Algorithms for Molecular Biology 11, 1-13, 2016	39	2016
Complexity issues in vertex-colored graph pattern matching R Dondi, G Fertin, S Vialette Journal of Discrete Algorithms 9 (1), 82-99, 2011	38	2011
Variants of constrained longest common subsequence P Bonizzoni, G Della Vedova, R Dondi, Y Pirola Information Processing Letters 110 (20), 877-881, 2010	38	2010
The binary perfect phylogeny with persistent characters P Bonizzoni, C Braghin, R Dondi, G Trucco Theoretical computer science 454, 51-63, 2012	34	2012
Maximum motif problem in vertex-colored graphs R Dondi, G Fertin, S Vialette Annual Symposium on Combinatorial Pattern Matching, 221-235, 2009	32	2009
Correlation clustering and consensus clustering P Bonizzoni, G Della Vedova, R Dondi, T Jiang International Symposium on Algorithms and Computation, 226-235, 2005	30	2005
Inferring (biological) signal transduction networks via transitive reductions of directed graphs R Albert, B DasGupta, R Dondi, E Sontag Algorithmica 51, 129-159, 2008	29	2008
Computational methods for resting-state EEG of patients with disorders of consciousness S Corchs, G Chioma, R Dondi, F Gasparini, S Manzoni, ... Frontiers in neuroscience 13, 807, 2019	25	2019
Polytomy refinement for the correction of dubious duplications in gene trees M Lafond, C Chauve, R Dondi, N El-Mabrouk Bioinformatics 30 (17), i519-i526, 2014	25	2014
Gene tree correction for reconciliation and species tree inference: complexity and algorithms R Dondi, N El-Mabrouk, KM Swenson Journal of Discrete Algorithms 25, 51-65, 2014	24	2014
On the parameterized complexity of the repetition free longest common subsequence problem G Blin, P Bonizzoni, R Dondi, F Sikora Information Processing Letters 112 (7), 272-276, 2012	24	2012

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