Jan Brezovsky

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Jiri DamborskyMasaryk UniversityE-mailová adresa ověřena na: chemi.muni.cz
Zbynek ProkopMasaryk UniversityE-mailová adresa ověřena na: chemi.muni.cz
Artur GóraBiotechnology Centre Silesian University of TechnologyE-mailová adresa ověřena na: artgora.com
Jaroslav BendlIcahn School of Medicine at Mount Sinai, New YorkE-mailová adresa ověřena na: mssm.edu
Barbora Kozlikovaassoc. prof., Masaryk UniversityE-mailová adresa ověřena na: fi.muni.cz
Martin HofProfessorE-mailová adresa ověřena na: jh-inst.cas.cz
Jan SykoraCzech Technical UniversityE-mailová adresa ověřena na: fel.cvut.cz
Pavel DvořákAssociate Professor and PI at Masaryk University, Brno, Czech RepublicE-mailová adresa ověřena na: sci.muni.cz
Morteza KhabiriAssistant Professor of Biology, Quinnipiac UniversityE-mailová adresa ověřena na: quinnipiac.edu
Bartłomiej SurpetaInternational Institute of Molecular and Cell Biology in WarsawE-mailová adresa ověřena na: iimcb.gov.pl
Pavlina RezacovaHead of Structural Biology, Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech RepublicE-mailová adresa ověřena na: uochb.cas.cz
Jiří FilipovičResearch group leader, Institute of Computer Science, Masaryk UniversityE-mailová adresa ověřena na: mail.muni.cz
Mariana AmaroJ. Heyrovsky Institute of Physical ChemistryE-mailová adresa ověřena na: jh-inst.cas.cz
Sequeiros-Borja CarlosMScE-mailová adresa ověřena na: amu.edu.pl
Uwe BornscheuerProfessor, Biotechnology and Enzyme Catalysis, Greifswald UniversityE-mailová adresa ověřena na: uni-greifswald.de
David BakerUniversity of WashingtonE-mailová adresa ověřena na: uw.edu
Sagar KhareAssistant Professor of Chemistry and Chemical Biology, Rutgers UniversityE-mailová adresa ověřena na: rutgers.edu
Dick B. JanssenUniversity of GroningenE-mailová adresa ověřena na: rug.nl
Jan FlorianLoyola University ChicagoE-mailová adresa ověřena na: luc.edu
Aravind Selvaram ThirunavukarasuAdam Mickiewicz UniversityE-mailová adresa ověřena na: amu.edu.pl

Sledovat

Jan Brezovsky

Laboratory of Biomolecular Interactions and Transport, IIMCB in Warsaw and IBMIB, AMU in Poznan

E-mailová adresa ověřena na: iimcb.gov.pl - Domovská stránka

molecular biophysics computer simulations proteins ligand transport


Název Seřadit podle citací Seřadit podle roku Seřadit podle názvu	Citace Citace	Rok
CAVER 3.0: a tool for the analysis of transport pathways in dynamic protein structures E Chovancova, A Pavelka, P Benes, O Strnad, J Brezovsky, B Kozlikova, ... PLOS Computational Biology 8 (10), e1002708, 2012	1093	2012
PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations J Bendl, J Stourac, O Salanda, A Pavelka, ED Wieben, J Zendulka, ... PLoS Comput Biol 10 (1), e1003440, 2014	704	2014
CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories A Jurcik, D Bednar, J Byska, SM Marques, K Furmanova, L Daniel, ... Bioinformatics 34 (20), 3586-3588, 2018	254	2018
Gates of enzymes A Gora, J Brezovsky, J Damborsky Chemical reviews 113 (8), 5871-5923, 2013	248	2013
Computational tools for designing and engineering enzymes J Damborsky, J Brezovsky Current opinion in chemical biology 19, 8-16, 2014	235	2014
PredictSNP2: a unified platform for accurately evaluating SNP effects by exploiting the different characteristics of variants in distinct genomic regions J Bendl, M Musil, J Štourač, J Zendulka, J Damborský, J Brezovský PLoS computational biology 12 (5), e1004962, 2016	170	2016
Tools and data services registry: a community effort to document bioinformatics resources J Ison, K Rapacki, H Ménager, M Kalaš, E Rydza, P Chmura, C Anthon, ... Nucleic acids research 44 (D1), D38-D47, 2016	158	2016
CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures B Kozlikova, E Sebestova, V Sustr, J Brezovsky, O Strnad, L Daniel, ... Bioinformatics 30 (18), 2684-2685, 2014	158	2014
Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel T Koudelakova, R Chaloupkova, J Brezovsky, Z Prokop, E Sebestova, ... Angewandte Chemie 125 (7), 2013-2017, 2013	153	2013
FireProt: energy-and evolution-based computational design of thermostable multiple-point mutants D Bednar, K Beerens, E Sebestova, J Bendl, S Khare, R Chaloupkova, ... PLoS computational biology 11 (11), e1004556, 2015	149	2015
Caver Web 1.0: identification of tunnels and channels in proteins and analysis of ligand transport J Stourac, O Vavra, P Kokkonen, J Filipovic, G Pinto, J Brezovsky, ... Nucleic acids research 47 (W1), W414-W422, 2019	148	2019
Computational tools for designing and engineering biocatalysts J Damborsky, J Brezovsky Current opinion in chemical biology 13 (1), 26-34, 2009	145	2009
Substrate specificity of haloalkane dehalogenases T Koudelakova, E Chovancova, J Brezovsky, M Monincova, A Fortova, ... Biochemical Journal 435 (2), 345-354, 2011	133	2011
Enantioselectivity of haloalkane dehalogenases and its modulation by surface loop engineering Z Prokop, Y Sato, J Brezovsky*, T Mozga, R Chaloupkova, ... Angewandte Chemie International Edition 49 (35), 6111-6115, 2010	132	2010
CAVER: algorithms for analyzing dynamics of tunnels in macromolecules A Pavelka, E Sebestova, B Kozlikova, J Brezovsky, J Sochor, ... IEEE/ACM transactions on computational biology and bioinformatics 13 (3 …, 2015	125	2015
FireProt: web server for automated design of thermostable proteins M Musil, J Stourac, J Bendl, J Brezovsky, Z Prokop, J Zendulka, ... Nucleic acids research 45 (W1), W393-W399, 2017	121	2017
Software tools for identification, visualization and analysis of protein tunnels and channels J Brezovsky, E Chovancova, A Gora, A Pavelka, L Biedermannova, ... Biotechnology advances 31 (1), 38-49, 2013	110	2013
Engineering a de novo transport tunnel J Brezovsky, P Babkova, O Degtjarik, A Fortova, A Gora, I Iermak, ... ACS Catalysis 6 (11), 7597-7610, 2016	94	2016
HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering J Bendl, J Stourac, E Sebestova, O Vavra, M Musil, J Brezovsky*, ... Nucleic acids research 44 (W1), W479-W487, 2016	92	2016
Enzyme tunnels and gates as relevant targets in drug design SM Marques, L Daniel, T Buryska, Z Prokop, J Brezovsky, J Damborsky Medicinal Research Reviews 37 (5), 1095-1139, 2017	74	2017

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