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Rachele Cagliani
Rachele Cagliani
Scientific Institute IRCCS E. MEDEA, Bioinformatics
Verified email at lanostrafamiglia.it
Title
Cited by
Cited by
Year
Molecular evolution of human coronavirus genomes
D Forni, R Cagliani, M Clerici, M Sironi
Trends in microbiology 25 (1), 35-48, 2017
8982017
Parasites represent a major selective force for interleukin genes and shape the genetic predisposition to autoimmune conditions
M Fumagalli, U Pozzoli, R Cagliani, GP Comi, S Riva, M Clerici, ...
Journal of Experimental Medicine 206 (6), 1395-1408, 2009
3072009
Evolutionary insights into host–pathogen interactions from mammalian sequence data
M Sironi, R Cagliani, D Forni, M Clerici
Nature Reviews Genetics 16 (4), 224-236, 2015
2572015
Clinical, molecular, and protein correlations in a large sample of genetically diagnosed Italian limb girdle muscular dystrophy patients
M Guglieri, F Magri, MG D'Angelo, A Prelle, L Morandi, C Rodolico, ...
Human mutation 29 (2), 258-266, 2008
2122008
Widespread balancing selection and pathogen-driven selection at blood group antigen genes
M Fumagalli, R Cagliani, U Pozzoli, S Riva, GP Comi, G Menozzi, ...
Genome research 19 (2), 199-212, 2009
1802009
Silencer elements as possible inhibitors of pseudoexon splicing
M Sironi, G Menozzi, L Riva, R Cagliani, GP Comi, N Bresolin, R Giorda, ...
Nucleic acids research 32 (5), 1783-1791, 2004
1732004
Computational inference of selection underlying the evolution of the novel coronavirus, severe acute respiratory syndrome coronavirus 2
R Cagliani, D Forni, M Clerici, M Sironi
Journal of virology 94 (12), 10.1128/jvi. 00411-20, 2020
1542020
A common polymorphism in TLR3 confers natural resistance to HIV-1 infection
M Sironi, M Biasin, R Cagliani, D Forni, M De Luca, I Saulle, S Lo Caputo, ...
The Journal of Immunology 188 (2), 818-823, 2012
1412012
Genetic diversity at endoplasmic reticulum aminopeptidases is maintained by balancing selection and is associated with natural resistance to HIV-1 infection
R Cagliani, S Riva, M Biasin, M Fumagalli, U Pozzoli, S Lo Caputo, ...
Human molecular genetics 19 (23), 4705-4714, 2010
992010
Mutation finding in patients with dysferlin deficiency and role of the dysferlin interacting proteins annexin A1 and A2 in muscular dystrophies
R Cagliani, F Magri, A Toscano, L Merlini, F Fortunato, C Lamperti, ...
Human mutation 26 (3), 283-283, 2005
962005
Both selective and neutral processes drive GC content evolution in the human genome
U Pozzoli, G Menozzi, M Fumagalli, M Cereda, GP Comi, R Cagliani, ...
BMC evolutionary biology 8 (1), 1-12, 2008
892008
The landscape of human genes involved in the immune response to parasitic worms
M Fumagalli, U Pozzoli, R Cagliani, GP Comi, N Bresolin, M Clerici, ...
BMC Evolutionary Biology 10, 1-15, 2010
862010
The signature of long-standing balancing selection at the human defensin β-1 promoter
R Cagliani, M Fumagalli, S Riva, U Pozzoli, GP Comi, G Menozzi, ...
Genome Biology 9, 1-11, 2008
862008
Coding potential and sequence conservation of SARS-CoV-2 and related animal viruses
R Cagliani, D Forni, M Clerici, M Sironi
Infection, Genetics and Evolution 83, 104353, 2020
842020
Analysis of intronic conserved elements indicates that functional complexity might represent a major source of negative selection on non-coding sequences
M Sironi, G Menozzi, GP Comi, R Cagliani, N Bresolin, U Pozzoli
Human molecular genetics 14 (17), 2533-2546, 2005
802005
Genome-wide identification of susceptibility alleles for viral infections through a population genetics approach
M Fumagalli, U Pozzoli, R Cagliani, GP Comi, N Bresolin, M Clerici, ...
PLoS genetics 6 (2), e1000849, 2010
782010
Extensive positive selection drives the evolution of nonstructural proteins in lineage C betacoronaviruses
D Forni, R Cagliani, A Mozzi, U Pozzoli, N Al-Daghri, M Clerici, M Sironi
Journal of virology 90 (7), 3627-3639, 2016
762016
The evolutionary history of genes involved in spoken and written language: beyond FOXP2
A Mozzi, D Forni, M Clerici, U Pozzoli, S Mascheretti, FR Guerini, S Riva, ...
Scientific reports 6 (1), 22157, 2016
742016
A Functional Variant in ERAP1 Predisposes to Multiple Sclerosis
FR Guerini, R Cagliani, D Forni, C Agliardi, D Caputo, A Cassinotti, ...
PloS one 7 (1), e29931, 2012
722012
Nonstructural proteins are preferential positive selection targets in Zika virus and related flaviviruses
M Sironi, D Forni, M Clerici, R Cagliani
PLoS neglected tropical diseases 10 (9), e0004978, 2016
712016
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