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Marcel M. Ramos Pérez
Marcel M. Ramos Pérez
CUNY Graduate School of Public Health and Health Policy
Verified email at sph.cuny.edu - Homepage
Title
Cited by
Cited by
Year
Accessible, curated metagenomic data through ExperimentHub
E Pasolli, L Schiffer, P Manghi, A Renson, V Obenchain, DT Truong, ...
Nature methods 14 (11), 1023-1024, 2017
2112017
Software for the integration of multiomics experiments in bioconductor
M Ramos, L Schiffer, A Re, R Azhar, A Basunia, C Rodriguez, T Chan, ...
Cancer research 77 (21), e39-e42, 2017
692017
Toward a gold standard for benchmarking gene set enrichment analysis
L Geistlinger, G Csaba, M Santarelli, M Ramos, L Schiffer, N Turaga, ...
Briefings in bioinformatics 22 (1), 545-556, 2021
632021
Public data and open source tools for multi-assay genomic investigation of disease
L Kannan, M Ramos, A Re, N El-Hachem, Z Safikhani, DMA Gendoo, ...
Briefings in bioinformatics 17 (4), 603-615, 2016
572016
Racial and ethnic subgroup disparities in hypertension prevalence, New York City Health and Nutrition Examination Survey, 2013–2014
K Fei
Preventing chronic disease 14, 2017
542017
Multiomic Analysis of Subtype Evolution and Heterogeneity in High-Grade Serous Ovarian CarcinomaMultiomic Analysis of Subtype Evolution in Ovarian Cancer
L Geistlinger, S Oh, M Ramos, L Schiffer, RS LaRue, CM Henzler, ...
Cancer research 80 (20), 4335-4345, 2020
272020
HMP16SData: Efficient Access to the Human Microbiome Project Through Bioconductor
L Schiffer, R Azhar, L Shepherd, M Ramos, L Geistlinger, C Huttenhower, ...
American journal of epidemiology 188 (6), 1023-1026, 2019
222019
Multiomic integration of public oncology databases in bioconductor
M Ramos, L Geistlinger, S Oh, L Schiffer, R Azhar, H Kodali, I de Bruijn, ...
JCO Clinical Cancer Informatics 1, 958-971, 2020
172020
Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space
MC Schatz, AA Philippakis, E Afgan, E Banks, VJ Carey, RJ Carroll, ...
Cell genomics 2 (1), 100085, 2022
162022
A longitudinal analysis of albendazole treatment effect on neurocysticercosis cyst evolution using multistate models
MA Montgomery, M Ramos, EA Kelvin, A Carpio, A Jaramillo, WA Hauser, ...
Transactions of the Royal Society of Tropical Medicine and Hygiene 113 (12 …, 2019
132019
The Doppelgänger effect: Hidden duplicates in databases of transcriptome profiles
L Waldron, M Riester, M Ramos, G Parmigiani, M Birrer
JNCI: Journal of the National Cancer Institute 108 (11), 2016
132016
Deliberative and intuitive risk perceptions as predictors of colorectal cancer screening over time
JL Hay, M Ramos, Y Li, S Holland, D Brennessel, MM Kemeny
Journal of behavioral medicine 39 (1), 65-74, 2016
132016
curatedtcga data: Curated data from the cancer genome atlas (tcga) as multiassayexperiment objects
M Ramos, L Waldron, L Schiffer, L Geistlinger, V Obenchain, M Morgan
R package version 1 (5), 2020
122020
Pilot Study of Skin Cancer Risk Reduction Behaviors, Cancer Communication, and Skin Cancer Beliefs in Hispanics
SM Torres, M Ramos, R Leverence, D Bowen, M Berwick, J Hay
Californian Journal of Health Promotion 12 (1), 95-100, 2014
112014
Reliable analysis of clinical tumor-only whole-exome sequencing data
S Oh, L Geistlinger, M Ramos, M Morgan, L Waldron, M Riester
JCO Clinical Cancer Informatics 4, 321-335, 2020
92020
CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes
V Da Silva, M Ramos, M Groenen, R Crooijmans, A Johansson, ...
Bioinformatics 36 (3), 972-973, 2020
82020
HGNChelper: identification and correction of invalid gene symbols for human and mouse
S Oh, J Abdelnabi, R Al-Dulaimi, A Aggarwal, M Ramos, S Davis, ...
F1000Research 9, 2020
82020
TCGAutils: TCGA utility functions for data management
M Ramos, L Schiffer, L Waldron
R package version 1 (0), 2019
72019
BiocManager: Access the Bioconductor Project Package Repository; 2019
M Morgan, M Ramos
Reference Source, 0
7
Software for the integration of Multi-Omics experiments in Bioconductor. bioRxiv. 2017
M Ramos, L Schiffer, A Re
Publisher Full Text, 0
4
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