Marcel M. Ramos Pérez
Marcel M. Ramos Pérez
CUNY Graduate School of Public Health and Health Policy
Verified email at - Homepage
Cited by
Cited by
Accessible, curated metagenomic data through ExperimentHub
E Pasolli, L Schiffer, P Manghi, A Renson, V Obenchain, DT Truong, ...
Nature methods 14 (11), 1023-1024, 2017
Toward a gold standard for benchmarking gene set enrichment analysis
L Geistlinger, G Csaba, M Santarelli, M Ramos, L Schiffer, N Turaga, ...
Briefings in bioinformatics 22 (1), 545-556, 2021
Software for the integration of multiomics experiments in bioconductor
M Ramos, L Schiffer, A Re, R Azhar, A Basunia, C Rodriguez, T Chan, ...
Cancer research 77 (21), e39-e42, 2017
Racial and ethnic subgroup disparities in hypertension prevalence, New York City Health and Nutrition Examination Survey, 2013–2014
K Fei
Preventing chronic disease 14, 2017
Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space
MC Schatz, AA Philippakis, E Afgan, E Banks, VJ Carey, RJ Carroll, ...
Cell Genomics 2 (1), 2022
Public data and open source tools for multi-assay genomic investigation of disease
L Kannan, M Ramos, A Re, N El-Hachem, Z Safikhani, DMA Gendoo, ...
Briefings in bioinformatics 17 (4), 603-615, 2016
Multiomic analysis of subtype evolution and heterogeneity in high-grade serous ovarian carcinoma
L Geistlinger, S Oh, M Ramos, L Schiffer, RS LaRue, CM Henzler, ...
Cancer research 80 (20), 4335-4345, 2020
Multiomic integration of public oncology databases in bioconductor
M Ramos, L Geistlinger, S Oh, L Schiffer, R Azhar, H Kodali, I de Bruijn, ...
JCO Clinical Cancer Informatics 1, 958-971, 2020
HMP16SData: Efficient Access to the Human Microbiome Project Through Bioconductor
L Schiffer, R Azhar, L Shepherd, M Ramos, L Geistlinger, C Huttenhower, ...
American journal of epidemiology 188 (6), 1023-1026, 2019
Reliable analysis of clinical tumor-only whole-exome sequencing data
S Oh, L Geistlinger, M Ramos, M Morgan, L Waldron, M Riester
JCO Clinical Cancer Informatics 4, 321-335, 2020
Deliberative and intuitive risk perceptions as predictors of colorectal cancer screening over time
JL Hay, M Ramos, Y Li, S Holland, D Brennessel, MM Kemeny
Journal of behavioral medicine 39, 65-74, 2016
The Doppelgänger effect: hidden duplicates in databases of transcriptome profiles
L Waldron, M Riester, M Ramos, G Parmigiani, M Birrer
Journal of the National Cancer Institute 108 (11), djw146, 2016
HGNChelper: identification and correction of invalid gene symbols for human and mouse
S Oh, J Abdelnabi, R Al-Dulaimi, A Aggarwal, M Ramos, S Davis, ...
F1000Research 9, 2020
CNVRanger: association analysis of CNVs with gene expression and quantitative phenotypes
V da Silva, M Ramos, M Groenen, R Crooijmans, A Johansson, ...
Bioinformatics 36 (3), 972-973, 2020
BiocManager: Access the Bioconductor Project Package Repository, 2021
M Morgan
R package version 1 (4), 0
A longitudinal analysis of albendazole treatment effect on neurocysticercosis cyst evolution using multistate models
MA Montgomery, M Ramos, EA Kelvin, A Carpio, A Jaramillo, WA Hauser, ...
Transactions of the Royal Society of Tropical Medicine and Hygiene 113 (12 …, 2019
Pilot Study of Skin Cancer Risk Reduction Behaviors, Cancer Communication, and Skin Cancer Beliefs in Hispanics
SM Torres, M Ramos, R Leverence, D Bowen, M Berwick, J Hay
Californian Journal of Health Promotion 12 (1), 95-100, 2014
Global alliance for genomics and health meets bioconductor: Toward reproducible and agile cancer genomics at cloud scale
VJ Carey, M Ramos, BJ Stubbs, S Gopaulakrishnan, S Oh, N Turaga, ...
JCO Clinical Cancer Informatics 4, 472-479, 2020
GenomicSuperSignature facilitates interpretation of RNA-seq experiments through robust, efficient comparison to public databases
S Oh, L Geistlinger, M Ramos, D Blankenberg, M van den Beek, ...
Nature Communications 13 (1), 3695, 2022
Curated single cell multimodal landmark datasets for R/Bioconductor
KB Eckenrode, D Righelli, M Ramos, R Argelaguet, C Vanderaa, ...
PLOS Computational Biology 19 (8), e1011324, 2023
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