James Osborne
James Osborne
E-mailová adresa ověřena na: unimelb.edu.au - Domovská stránka
Název
Citace
Citace
Rok
Chaste: an open source C++ library for computational physiology and biology
GR Mirams, CJ Arthurs, MO Bernabeu, R Bordas, J Cooper, A Corrias, ...
PLoS computational biology 9 (3), e1002970, 2013
3912013
Chaste: a test-driven approach to software development for biological modelling
J Pitt-Francis, P Pathmanathan, MO Bernabeu, R Bordas, J Cooper, ...
Computer Physics Communications 180 (12), 2452-2471, 2009
2712009
An integrative computational model for intestinal tissue renewal
IMM Van Leeuwen, GR Mirams, A Walter, A Fletcher, P Murray, J Osborne, ...
Cell proliferation 42 (5), 617-636, 2009
1712009
A hybrid approach to multi-scale modelling of cancer
JM Osborne, A Walter, SK Kershaw, GR Mirams, AG Fletcher, ...
Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2010
1352010
Comparing individual-based approaches to modelling the self-organization of multicellular tissues
JM Osborne, AG Fletcher, JM Pitt-Francis, PK Maini, DJ Gavaghan
PLoS computational biology 13 (2), e1005387, 2017
1302017
A computational study of discrete mechanical tissue models
P Pathmanathan, J Cooper, A Fletcher, G Mirams, P Murray, J Osborne, ...
Physical biology 6 (3), 036001, 2009
1222009
Implementing vertex dynamics models of cell populations in biology within a consistent computational framework
AG Fletcher, JM Osborne, PK Maini, DJ Gavaghan
Progress in biophysics and molecular biology 113 (2), 299-326, 2013
1092013
Cell morphology drives spatial patterning in microbial communities
WPJ Smith, Y Davit, JM Osborne, W Kim, KR Foster, JM Pitt-Francis
Proceedings of the National Academy of Sciences 114 (3), E280-E286, 2017
1022017
Chaste: using agile programming techniques to develop computational biology software
J Pitt-Francis, MO Bernabeu, J Cooper, A Garny, L Momtahan, J Osborne, ...
Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2008
972008
Cooperation, competition and antibiotic resistance in bacterial colonies
I Frost, WPJ Smith, S Mitri, A San Millan, Y Davit, JM Osborne, ...
The ISME journal 12 (6), 1582-1593, 2018
892018
Paneth cell-rich regions separated by a cluster of Lgr5+ cells initiate crypt fission in the intestinal stem cell niche
AJ Langlands, AA Almet, PL Appleton, IP Newton, JM Osborne, IS Näthke
PLoS biology 14 (6), e1002491, 2016
632016
Computational models reveal a passive mechanism for cell migration in the crypt
SJ Dunn, IS Näthke, JM Osborne
PloS one 8 (11), e80516, 2013
502013
Reversible host cell remodeling underpins deformability changes in malaria parasite sexual blood stages
M Dearnley, T Chu, Y Zhang, O Looker, C Huang, N Klonis, J Yeoman, ...
Proceedings of the National Academy of Sciences 113 (17), 4800-4805, 2016
492016
Ten simple rules for a successful cross-disciplinary collaboration
B Knapp, R Bardenet, MO Bernabeu, R Bordas, M Bruna, B Calderhead, ...
PLoS Computational Biology 11 (4), e1004214, 2015
462015
Ten simple rules for effective computational research
JM Osborne, MO Bernabeu, M Bruna, B Calderhead, J Cooper, ...
PLoS Computational Biology 10 (3), e1003506, 2014
462014
A two-dimensional model of the colonic crypt accounting for the role of the basement membrane and pericryptal fibroblast sheath
SJ Dunn, PL Appleton, SA Nelson, IS Näthke, DJ Gavaghan, JM Osborne
PLoS computational biology 8 (5), e1002515, 2012
462012
Hydrodynamic dispersion within porous biofilms
Y Davit, H Byrne, J Osborne, J Pitt-Francis, D Gavaghan, M Quintard
Physical Review E 87 (1), 012718, 2013
442013
The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt
SK Kay, HA Harrington, S Shepherd, K Brennan, T Dale, JM Osborne, ...
PLoS computational biology 13 (2), e1005400, 2017
382017
Mechano-logical model of C. elegans germ line suggests feedback on the cell cycle
K Atwell, Z Qin, D Gavaghan, H Kugler, EJA Hubbard, JM Osborne
Development 142 (22), 3902-3911, 2015
352015
Modelling the role of the basement membrane beneath a growing epithelial monolayer
SJ Dunn, AG Fletcher, SJ Chapman, DJ Gavaghan, JM Osborne
Journal of theoretical biology 298, 82-91, 2012
352012
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Články 1–20