| Two distinct modes for propagation of histone PTMs across the cell cycle C Alabert, TK Barth, N Reverón-Gómez, S Sidoli, A Schmidt, ON Jensen, ... Genes & development 29 (6), 585-590, 2015 | 383 | 2015 |
| High-resolution mapping of RNA-binding regions in the nuclear proteome of embryonic stem cells C He, S Sidoli, R Warneford-Thomson, DC Tatomer, JE Wilusz, BA Garcia, ... Molecular cell 64 (2), 416-430, 2016 | 251 | 2016 |
| Transcription factor cooperativity in early adipogenic hotspots and super-enhancers R Siersbæk, A Rabiee, R Nielsen, S Sidoli, S Traynor, A Loft, ... Cell reports 7 (5), 1443-1455, 2014 | 248 | 2014 |
| An integrated multi-omics approach identifies epigenetic alterations associated with Alzheimer’s disease R Nativio, Y Lan, G Donahue, S Sidoli, A Berson, AR Srinivasan, ... Nature genetics 52 (10), 1024-1035, 2020 | 227 | 2020 |
| Acetyl-CoA metabolism supports multistep pancreatic tumorigenesis A Carrer, S Trefely, S Zhao, SL Campbell, RJ Norgard, KC Schultz, ... Cancer discovery 9 (3), 416-435, 2019 | 216 | 2019 |
| Complete workflow for analysis of histone post-translational modifications using bottom-up mass spectrometry: from histone extraction to data analysis S Sidoli, NV Bhanu, KR Karch, X Wang, BA Garcia JoVE (Journal of Visualized Experiments), e54112, 2016 | 200 | 2016 |
| Alcohol metabolism contributes to brain histone acetylation P Mews, G Egervari, R Nativio, S Sidoli, G Donahue, SI Lombroso, ... Nature 574 (7780), 717-721, 2019 | 182 | 2019 |
| Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes JS Becker, RL McCarthy, S Sidoli, G Donahue, KE Kaeding, Z He, S Lin, ... Molecular cell 68 (6), 1023-1037. e15, 2017 | 182 | 2017 |
| Characterization of histone acylations links chromatin modifications with metabolism J Simithy, S Sidoli, ZF Yuan, M Coradin, NV Bhanu, DM Marchione, ... Nature communications 8 (1), 1141, 2017 | 178 | 2017 |
| H3K9me3-heterochromatin loss at protein-coding genes enables developmental lineage specification D Nicetto, G Donahue, T Jain, T Peng, S Sidoli, L Sheng, T Montavon, ... Science 363 (6424), 294-297, 2019 | 176 | 2019 |
| Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry S Sidoli, L Cheng, ON Jensen Journal of proteomics 75 (12), 3419-3433, 2012 | 150 | 2012 |
| Domain-focused CRISPR screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells JD Grevet, X Lan, N Hamagami, CR Edwards, L Sankaranarayanan, X Ji, ... Science 361 (6399), 285-290, 2018 | 142 | 2018 |
| EpiProfile 2.0: a computational platform for processing epi-proteomics mass spectrometry data ZF Yuan, S Sidoli, DM Marchione, J Simithy, KA Janssen, MR Szurgot, ... Journal of proteome research 17 (7), 2533-2541, 2018 | 136 | 2018 |
| Loss of HP1 causes depletion of H3K27me3 from facultative heterochromatin and gain of H3K27me2 at constitutive heterochromatin K Jamieson, ET Wiles, KJ McNaught, S Sidoli, N Leggett, Y Shao, ... Genome research 26 (1), 97-107, 2016 | 124 | 2016 |
| H1 histones control the epigenetic landscape by local chromatin compaction MA Willcockson, SE Healton, CN Weiss, BA Bartholdy, Y Botbol, ... Nature 589 (7841), 293-298, 2021 | 120 | 2021 |
| Histone acetyltransferase p300 induces de novo super-enhancers to drive cellular senescence P Sen, Y Lan, CY Li, S Sidoli, G Donahue, Z Dou, B Frederick, Q Chen, ... Molecular cell 73 (4), 684-698. e8, 2019 | 104 | 2019 |
| Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists M Milioli, M Ibáñez-Vea, S Sidoli, G Palmisano, M Careri, MR Larsen Journal of proteomics 121, 56-66, 2015 | 104 | 2015 |
| EpiProfile quantifies histone peptides with modifications by extracting retention time and intensity in high-resolution mass spectra*[S] ZF Yuan, S Lin, RC Molden, XJ Cao, NV Bhanu, X Wang, S Sidoli, S Liu, ... Molecular & Cellular Proteomics 14 (6), 1696-1707, 2015 | 99 | 2015 |
| Guide for protein fold change and p-value calculation for non-experts in proteomics JT Aguilan, K Kulej, S Sidoli Molecular omics 16 (6), 573-582, 2020 | 92 | 2020 |
| Time-resolved global and chromatin proteomics during herpes simplex virus type 1 (HSV-1) infection K Kulej, DC Avgousti, S Sidoli, C Herrmann, AN Della Fera, ET Kim, ... Molecular & Cellular Proteomics 16 (4), S92-S107, 2017 | 92 | 2017 |
Ben GarciaAssociate Professor, University of Pennsylvania School of MedicineVerified email at mail.med.upenn.edu
