| The effect of human mobility and control measures on the COVID-19 epidemic in China MUG Kraemer, CH Yang, B Gutierrez, CH Wu, B Klein, DM Pigott, ... Science 368 (64), 493-497, 2020 | 2043 | 2020 |
| Zika virus in the Americas: early epidemiological and genetic findings NR Faria, RSS Azevedo, MUG Kraemer, R Souza, MS Cunha, SC Hill, ... Science 352 (6283), 345-9, 2016 | 1008 | 2016 |
| Genomics and epidemiology of the P. 1 SARS-CoV-2 lineage in Manaus, Brazil NR Faria, TA Mellan, C Whittaker, IM Claro, DS Candido, S Mishra, ... Science 372 (6544), 815-821, 2021 | 827 | 2021 |
| The early spread and epidemic ignition of HIV-1 in human populations NR Faria, A Rambaut, MA Suchard, G Baele, T Bedford, M Ward, ... Science 346 (6205), 56-61, 2014 | 766 | 2014 |
| Resurgence of COVID-19 in Manaus, Brazil, despite high seroprevalence EC Sabino, LF Buss, MPS Carvalho, CA Prete Jr, MAE Crispim, NA Fraiji, ... The Lancet 397 (102), 452-455, 2021 | 674 | 2021 |
| Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples J Quick, ND Grubaugh, ST Pullan, IM Claro, AD Smith, K Gangavarapu, ... Nature Protocols 12 (6), 1261-1276, 2017 | 662 | 2017 |
| Establishment and cryptic transmission of Zika virus in Brazil and the Americas NR Faria, J Quick, I Morales, J Theze, JG de Jesus, M Giovanetti, ... Nature 546, 406-410, 2017 | 500 | 2017 |
| Emergence and potential for spread of Chikungunya virus in Brazil MRT Nunes, NR Faria, JM de Vasconcelos, N Golding, MUG Kraemer, ... BMC Medicine 13 (1), 1, 2015 | 465 | 2015 |
| Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus MUG Kraemer, RC Reiner Jr, OJ Brady, JP Messina, M Gilbert, DM Pigott, ... Nature Microbiology 4 (5), 901-901, 2019 | 448 | 2019 |
| Evolution and epidemic spread of SARS-CoV-2 in Brazil DS Candido, IM Claro, JG de Jesus, WM de Souza, FRR Moreira, ... Science 369 (6508), 1255-1260, 2020 | 447* | 2020 |
| Three-quarters attack rate of SARS-CoV-2 in the Brazilian Amazon during a largely unmitigated epidemic LF Buss, CA Prete, CMM Abrahim, A Mendrone, T Salomon, ... Science 371 (6526), 288-292, 2021 | 427 | 2021 |
| Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard Molecular Biology and Evolution 30 (3), 713-724, 2013 | 408 | 2013 |
| Virus genomes reveal factors that spread and sustained the Ebola epidemic G Dudas, LM Carvalho, T Bedford, AJ Tatem, G Baele, NR Faria, DJ Park, ... Nature 544 (7650), 309-315, 2017 | 345 | 2017 |
| Genomic characterisation of an emergent SARS-CoV-2 lineage in Manaus: preliminary findings NR Faria, IM Claro, D Candido, LAM Franco, PS Andrade, TM Coletti, ... Virological 372, 815-821, 2021 | 322 | 2021 |
| Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools AC Pineda-Peña, NR Faria, S Imbrechts, P Libin, AB Abecasis, ... Infect Genet Evol 19, 337-348, 2013 | 308 | 2013 |
| Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2 P Lemey, A Rambaut, T Bedford, NR Faria, F Bielejec, G Baele, ... PloS Pathogens 10 (2), e1003932, 2014 | 305 | 2014 |
| Genomic epidemiology reveals multiple introductions of Zika virus into the United States ND Grubaugh, JT Ladner, MUG Kraemer, G Dudas, AL Tan, ... Nature, 104794, 2017 | 293 | 2017 |
| Epidemiological and clinical characteristics of the early phase of the COVID-19 epidemic in Brazil WM de Souza, LF Buss, D da Silva Candido, JP Carrera, S Li, A Zarebski, ... Nature Human Behaviour, 856-865, 2020 | 279 | 2020 |
| The HIV-1 reservoir in eight patients on long-term suppressive antiretroviral therapy is stable with few genetic changes over time L Josefsson, S von Stockenstrom, NR Faria, E Sinclair, P Bacchetti, ... Proceedings of the National Academy of Sciences 110 (51), E4987-E4996, 2013 | 273 | 2013 |
| Genomic and epidemiological monitoring of yellow fever virus transmission potential NR Faria, MUG Kraemer, S Hill, JG de Jesus, RS de Aguiar, FCM Iani, ... Science 7115 (eaat7115), 2018 | 227 | 2018 |
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
