| FROGS: find, rapidly, OTUs with galaxy solution F Escudié, L Auer, M Bernard, M Mariadassou, L Cauquil, K Vidal, ... Bioinformatics 34 (8), 1287-1294, 2018 | 441 | 2018 |
| Uncovering latent structure in valued graphs: a variational approach M Mariadassou, S Robin, C Vacher The Annals of Applied Statistics 4 (2), 715-742, 2010 | 226 | 2010 |
| Beneficial metabolic effects of selected probiotics on diet‐induced obesity and insulin resistance in mice are associated with improvement of dysbiotic gut microbiota J Alard, V Lehrter, M Rhimi, I Mangin, V Peucelle, AL Abraham, ... Environmental microbiology 18 (5), 1484-1497, 2016 | 126 | 2016 |
| Quantitative prediction of genome-wide resource allocation in bacteria A Goelzer, J Muntel, V Chubukov, M Jules, E Prestel, R Nölker, ... Metabolic engineering 32, 232-243, 2015 | 108 | 2015 |
| Multiple comparative metagenomics using multiset k-mer counting G Benoit, P Peterlongo, M Mariadassou, E Drezen, S Schbath, D Lavenier, ... PeerJ Computer Science 2, e94, 2016 | 90 | 2016 |
| Gut bacteria are critical for optimal muscle function: a potential link with glucose homeostasis K Nay, M Jollet, B Goustard, N Baati, B Vernus, M Pontones, ... American Journal of Physiology-Endocrinology and Metabolism, 2019 | 89 | 2019 |
| Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes JK Cornuault, MA Petit, M Mariadassou, L Benevides, E Moncaut, ... Microbiome 6 (1), 1-14, 2018 | 68 | 2018 |
| Microbial ecosystems are dominated by specialist taxa M Mariadassou, S Pichon, D Ebert Ecology Letters 18 (9), 974-982, 2015 | 66 | 2015 |
| Inference of adaptive shifts for multivariate correlated traits P Bastide, C Ané, S Robin, M Mariadassou Systematic Biology 67 (4), 662-680, 2018 | 62 | 2018 |
| Variational inference for sparse network reconstruction from count data J Chiquet, S Robin, M Mariadassou International Conference on Machine Learning, 1162-1171, 2019 | 58 | 2019 |
| Olfactory epithelium changes in germfree mice A François, D Grebert, M Rhimi, M Mariadassou, L Naudon, S Rabot, ... Scientific reports 6 (1), 1-10, 2016 | 53 | 2016 |
| Variational inference for probabilistic Poisson PCA J Chiquet, M Mariadassou, S Robin The Annals of Applied Statistics 12 (4), 2674-2698, 2018 | 51 | 2018 |
| Local and Systemic Immune Mechanisms Underlying the Anti-Colitis Effects of the Dairy Bacterium Lactobacillus delbrueckii C Santos Rocha, AC Gomes-Santos, T Garcias Moreira, M de Azevedo, ... PLoS One 9 (1), e85923, 2014 | 51 | 2014 |
| Analysis of large 16S rRNA Illumina data sets: Impact of singleton read filtering on microbial community description L Auer, M Mariadassou, M O'Donohue, C Klopp, G Hernandez‐Raquet Molecular ecology resources 17 (6), e122-e132, 2017 | 49 | 2017 |
| Identification of proteins involved in the anti-inflammatory properties of Propionibacterium freudenreichii by means of a multi-strain study SM Deutsch, M Mariadassou, P Nicolas, S Parayre, R Le Guellec, ... Scientific reports 7 (1), 1-13, 2017 | 44 | 2017 |
| Convergence of the groups posterior distribution in latent or stochastic block models M Mariadassou, C Matias Bernoulli 21 (1), 537-573, 2015 | 44 | 2015 |
| Fructose malabsorption induces cholecystokinin expression in the ileum and cecum by changing microbiota composition and metabolism X Zhang, A Grosfeld, E Williams, D Vasiliauskas, S Barretto, L Smith, ... The FASEB Journal 33 (6), 7126-7142, 2019 | 34 | 2019 |
| Detection of adaptive shifts on phylogenies by using shifted stochastic processes on a tree P Bastide, M Mariadassou, S Robin Journal of the Royal Statistical Society: Series B (Statistical Methodology …, 2017 | 34 | 2017 |
| Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii V Loux, M Mariadassou, S Almeida, H Chiapello, A Hammani, J Buratti, ... BMC genomics 16 (1), 1-19, 2015 | 30 | 2015 |
| Comparative metatranscriptomic analysis of anaerobic digesters treating anionic surfactant contaminated wastewater TP Delforno, TZ Macedo, C Midoux, GV Lacerda Jr, O Rué, ... Science of the total environment 649, 482-494, 2019 | 29 | 2019 |
