Stephen Altschul
Stephen Altschul
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Cited by
Cited by
Basic local alignment search tool
SF Altschul, W Gish, W Miller, EW Myers, DJ Lipman
Journal of molecular biology 215 (3), 403-410, 1990
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
SF Altschul, TL Madden, AA Schäffer, J Zhang, Z Zhang, W Miller, ...
Nucleic acids research 25 (17), 3389-3402, 1997
Identification of FAP locus genes from chromosome 5q21
KW Kinzler, MC Nilbert, LK Su, B Vogelstein, TM Bryan, DB Levy, ...
Science 253 (5020), 661-665, 1991
Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment
CE Lawrence, SF Altschul, MS Boguski, JS Liu, AF Neuwald, JC Wootton
science 262 (5131), 208-214, 1993
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proceedings of the National Academy of Sciences 99 (26), 16899-16903, 2002
Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes
S Karlin, SF Altschul
Proceedings of the National Academy of Sciences 87 (6), 2264-2268, 1990
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements
AA Schäffer, L Aravind, TL Madden, S Shavirin, JL Spouge, YI Wolf, ...
Nucleic acids research 29 (14), 2994-3005, 2001
A workbench for multiple alignment construction and analysis
GD Schuler, SF Altschul, DJ Lipman
Proteins: Structure, Function, and Bioinformatics 9 (3), 180-190, 1991
Applications and statistics for multiple high-scoring segments in molecular sequences
S Karlin, SF Altschul
Proceedings of the National Academy of Sciences 90 (12), 5873-5877, 1993
[27] Local alignment statistics
SF Altschul, W Gish
Methods in enzymology 266, 460-480, 1996
Protein database searches using compositionally adjusted substitution matrices
SF Altschul, JC Wootton, EM Gertz, R Agarwala, A Morgulis, AA Schäffer, ...
The FEBS journal 272 (20), 5101-5109, 2005
Issues in searching molecular sequence databases
SF Altschul, MS Boguski, W Gish, JC Wootton
Nature genetics 6 (2), 119-129, 1994
Amino acid substitution matrices from an information theoretic perspective
SF Altschul
Journal of molecular biology 219 (3), 555-565, 1991
A superfamily of conserved domains in DNA damage-responsive cell cycle checkpoint proteins.
P Bork, K Hofmann, P Bucher, AF Neuwald, SF Altschul, EV Koonin
The FASEB Journal 11 (1), 68-76, 1997
Iterated profile searches with PSI-BLAST—a tool for discovery in protein databases
SF Altschul, EV Koonin
Trends in biochemical sciences 23 (11), 444-447, 1998
A tool for multiple sequence alignment
DJ Lipman, SF Altschul, JD Kececioglu
Proceedings of the National Academy of Sciences 86 (12), 4412-4415, 1989
Domain enhanced lookup time accelerated BLAST
GM Boratyn, AA Schäffer, R Agarwala, SF Altschul, DJ Lipman, ...
Biology direct 7 (1), 12, 2012
Protein database searches for multiple alignments.
SF Altschul, DJ Lipman
Proceedings of the National Academy of Sciences 87 (14), 5509-5513, 1990
A public database for gene expression in human cancers
A Lal, AE Lash, SF Altschul, V Velculescu, L Zhang, RE McLendon, ...
Cancer Research 59 (21), 5403-5407, 1999
… Functional motifs…
EV Koonin, SF Altschul, P Bork
Nature genetics 13 (3), 266-268, 1996
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