Aviv Madar
Aviv Madar
Director of Data science, Valo Health, Boston, MA
Verified email at - Homepage
Cited by
Cited by
Wisdom of crowds for robust gene network inference (As part of the DREAM5 consortium)
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods, 2012
A validated regulatory network for Th17 cell specification
M Ciofani, A Madar, C Galan, ML Sellars, K Mace, F Pauli, A Agarwal, ...
Cell 151 (2), 289-303, 2012
ICOS-based chimeric antigen receptors program bipolar TH17/TH1 cells
S Guedan, X Chen, A Madar, C Carpenito, SE McGettigan, MJ Frigault, ...
Blood, The Journal of the American Society of Hematology 124 (7), 1070-1080, 2014
A predictive model for transcriptional control of physiology in a free living cell
R Bonneau, MT Facciotti, DJ Reiss, AK Schmid, M Pan, A Kaur, ...
Cell 131 (7), 1354-1365, 2007
DREAM4: Combining genetic and dynamic information to identify biological networks and dynamical models
A Greenfield, A Madar, H Ostrer, R Bonneau
PloS one 5 (10), e13397, 2010
DREAM3: network inference using dynamic context likelihood of relatedness and the inferelator
A Madar, A Greenfield, E Vanden-Eijnden, R Bonneau
PloS one 5 (3), e9803, 2010
Accounting for eXentricities: analysis of the X chromosome in GWAS reveals X-linked genes implicated in autoimmune diseases
D Chang, F Gao, A Slavney, L Ma, YY Waldman, AJ Sams, P Billing-Ross, ...
PloS one 9 (12), e113684, 2014
Inhibition of androgen receptor and β-catenin activity in prostate cancer
E Lee, A Madar, G David, MJ Garabedian, R DasGupta, SK Logan
Proceedings of the National Academy of Sciences 110 (39), 15710-15715, 2013
Single residue in CD28-costimulated CAR-T cells limits long-term persistence and antitumor durability
S Guedan, A Madar, V Casado-Medrano, C Shaw, A Wing, F Liu, ...
The Journal of clinical investigation 130 (6), 3087-3097, 2020
Leveraging chromatin accessibility for transcriptional regulatory network inference in T Helper 17 Cells
ER Miraldi, M Pokrovskii, A Watters, DM Castro, N De Veaux, JA Hall, ...
Genome research 29 (3), 449-463, 2019
TET2-driven clonal hematopoiesis predicts enhanced response to canakinumab in the CANTOS trial: an exploratory analysis
EC Svensson, A Madar, CD Campbell, Y He, M Sultan, ML Healey, ...
Circulation 138 (Suppl_1), A15111-A15111, 2018
The Inferelator 2.0: a scalable framework for reconstruction of dynamic regulatory network models
A Madar, A Greenfield, H Ostrer, E Vanden-Eijnden, R Bonneau
2009 Annual International Conference of the IEEE Engineering in Medicine and …, 2009
TET2-driven clonal hematopoiesis and response to canakinumab: an exploratory analysis of the CANTOS randomized clinical trial
EC Svensson, A Madar, CD Campbell, Y He, M Sultan, ML Healey, H Xu, ...
JAMA cardiology 7 (5), 521-528, 2022
Release of stem cells from quiescence reveals gliogenic domains in the adult mouse brain
AC Delgado, AR Maldonado-Soto, V Silva-Vargas, D Mizrak, T von Känel, ...
Science 372 (6547), 1205-1209, 2021
Inhibition of β-catenin–TCF1 interaction delays differentiation of mouse embryonic stem cells
SS Chatterjee, A Saj, T Gocha, M Murphy, FC Gonsalves, X Zhang, ...
Journal of Cell Biology 211 (1), 39-51, 2015
Genotet: An interactive web-based visual exploration framework to support validation of gene regulatory networks
B Yu, H Doraiswamy, X Chen, E Miraldi, ML Arrieta-Ortiz, C Hafemeister, ...
IEEE transactions on visualization and computer graphics 20 (12), 1903-1912, 2014
Learning global models of transcriptional regulatory networks from data
A Madar, R Bonneau
Computational Systems Biology, 181-210, 2009
LNA043, a novel cartilage regenerative treatment for osteoarthritis: results from a first-in-human trial in patients with knee osteoarthritis
C Scotti, J Gimbel, D Laurent, A Madar, T Peters, Y Zhang, F Polus, ...
Release of stem cells from quiescence reveals multiple gliogenic domains in the adult brain
AC Delgado, AR Maldonado-Soto, V Silva-Vargas, D Mizrak, T Känel, ...
bioRxiv, 738013, 2019
Coronary artery disease polygenic risk score identifies patients at higher risk for recurrent cardiovascular events in the CANTOS Trial
H Xu, C Hon, S Kaiser, P Serrano-Fernandez, N Hartmann, DP Yates, ...
Circulation: Genomic and Precision Medicine 14 (6), e003440, 2021
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