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Rhonald Lua
Rhonald Lua
Unknown affiliation
Verified email at rice.edu
Title
Cited by
Cited by
Year
Statistics of knots, geometry of conformations, and evolution of proteins
RC Lua, AY Grosberg
PLoS computational biology 2 (5), e45, 2006
1902006
Single nucleotide variations: biological impact and theoretical interpretation
P Katsonis, A Koire, SJ Wilson, TK Hsu, RC Lua, AD Wilkins, O Lichtarge
Protein Science 23 (12), 1650-1666, 2014
1452014
Modelling microstructures with OOF2
ACE Reid, RC Lua, RE García, VR Coffman, SA Langer
International Journal of Materials and Product Technology 35 (3-4), 361-373, 2009
1312009
Image-based finite element mesh construction for material microstructures
ACE Reid, SA Langer, RC Lua, VR Coffman, SI Haan, RE García
Computational Materials Science 43 (4), 989-999, 2008
1302008
Practical applicability of the Jarzynski relation in statistical mechanics: A pedagogical example
RC Lua, AY Grosberg
The Journal of Physical Chemistry B 109 (14), 6805-6811, 2005
1242005
Fractal and statistical properties of large compact polymers: a computational study
R Lua, AL Borovinskiy, AY Grosberg
Polymer 45 (2), 717-731, 2004
1232004
Topologically driven swelling of a polymer loop
NT Moore, RC Lua, AY Grosberg
Proceedings of the National Academy of Sciences 101 (37), 13431-13435, 2004
1212004
Separation of Recombination and SOS Response in Escherichia coli RecA Suggests LexA Interaction Sites
AK Adikesavan, P Katsonis, DC Marciano, R Lua, C Herman, O Lichtarge
PLoS genetics 7 (9), e1002244, 2011
912011
Evolutionary trace for prediction and redesign of protein functional sites
A Wilkins, S Erdin, R Lua, O Lichtarge
Computational Drug Discovery and Design, 29-42, 2012
752012
PyETV: a PyMOL evolutionary trace viewer to analyze functional site predictions in protein complexes
RC Lua, O Lichtarge
Bioinformatics 26 (23), 2981-2982, 2010
592010
First passage times and asymmetry of DNA translocation
RC Lua, AY Grosberg
Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 72 (6 …, 2005
552005
Differential effects of collagen prolyl 3-hydroxylation on skeletal tissues
EP Homan, C Lietman, I Grafe, J Lennington, R Morello, D Napierala, ...
PLoS genetics 10 (1), e1004121, 2014
432014
Prediction and experimental validation of enzyme substrate specificity in protein structures
SR Amin, S Erdin, RM Ward, RC Lua, O Lichtarge
Proceedings of the National Academy of Sciences 110 (45), E4195-E4202, 2013
432013
Prediction and redesign of protein–protein interactions
RC Lua, DC Marciano, P Katsonis, AK Adikesavan, AD Wilkins, ...
Progress in biophysics and molecular biology 116 (2-3), 194-202, 2014
392014
UET: a database of evolutionarily-predicted functional determinants of protein sequences that cluster as functional sites in protein structures
RC Lua, SJ Wilson, DM Konecki, AD Wilkins, E Venner, DH Morgan, ...
Nucleic acids research 44 (D1), D308-D312, 2016
272016
Negative feedback in genetic circuits confers evolutionary resilience and capacitance
DC Marciano, RC Lua, P Katsonis, SR Amin, C Herman, O Lichtarge
Cell reports 7 (6), 1789-1795, 2014
262014
Accounting for epistatic interactions improves the functional analysis of protein structures
AD Wilkins, E Venner, DC Marciano, S Erdin, B Atri, RC Lua, O Lichtarge
Bioinformatics 29 (21), 2714-2721, 2013
262013
PyKnot: a PyMOL tool for the discovery and analysis of knots in proteins
RC Lua
Bioinformatics 28 (15), 2069-2071, 2012
252012
Sequence and structure continuity of evolutionary importance improves protein functional site discovery and annotation
AD Wilkins, R Lua, S Erdin, RM Ward, O Lichtarge
Protein Science 19 (7), 1296-1311, 2010
252010
The maternal-to-zygotic transition targets actin to promote robustness during morphogenesis
L Zheng, LA Sepúlveda, RC Lua, O Lichtarge, I Golding, AM Sokac
PLoS genetics 9 (11), e1003901, 2013
192013
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