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Jinhong Shi
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Year
Identifying protein complexes in protein–protein interaction networks by using clique seeds and graph entropy
B Chen, J Shi, S Zhang, FX Wu
Proteomics 13 (2), 269-277, 2013
352013
SVM-RFE based feature selection for tandem mass spectrum quality assessment
J Ding, J Shi, FX Wu
International journal of data mining and bioinformatics 5 (1), 73-88, 2011
332011
A novel approach to denoising ion trap tandem mass spectra
J Ding, J Shi, GG Poirier, FX Wu
Proteome Science 7 (1), 1-10, 2009
292009
Charge state determination of peptide tandem mass spectra using support vector machine (SVM)
AM Zou, J Shi, J Ding, FX Wu
IEEE Transactions on Information Technology in Biomedicine 14 (3), 552-558, 2010
202010
Antimicrobial resistance genetic factor identification from whole-genome sequence data using deep feature selection
J Shi, Y Yan, MG Links, L Li, JAR Dillon, M Horsch, A Kusalik
BMC bioinformatics 20 (15), 1-14, 2019
152019
Protein inference by assembling peptides identified from tandem mass spectra
J Shi, FX Wu
Current Bioinformatics 4 (3), 226-233, 2009
142009
Features-based deisotoping method for tandem mass spectra
Z Yuan, J Shi, W Lin, B Chen, FX Wu
Advances in Bioinformatics 2011, 2011
112011
Quality assessment of tandem mass spectra by using a weighted k-means
J Ding, J Shi, FX Wu
Clinical Proteomics 5 (1), 15-22, 2009
112009
Not AU protein complexes exhibit dense structures in S. cerevisiae PPI network
B Chen, J Shi, FX Wu
2012 IEEE International Conference on Bioinformatics and Biomedicine, 1-4, 2012
92012
Peptide charge state determination of tandem mass spectra from low-resolution collision induced dissociation
J Shi, FX Wu
Proteome science 9 (1), 1-8, 2011
92011
Unifying protein inference and peptide identification with feedback to update consistency between peptides
J Shi, B Chen, FX Wu
Proteomics 13 (2), 239-247, 2013
82013
An adaptive approach to denoising tandem mass spectra
W Lin, FX Wu, J Shi, J Ding, W Zhang
2010 IEEE International Conference on Bioinformatics and Biomedicine …, 2010
82010
An improved graph entropy-based method for identifying protein complexes
B Chen, Y Yan, J Shi, S Zhang, FX Wu
2011 IEEE International Conference on Bioinformatics and Biomedicine, 123-126, 2011
72011
Statistical analysis of Mascot peptide identification with active logistic regression
J Shi, W Lin, FX Wu
2010 4th International Conference on Bioinformatics and Biomedical …, 2010
62010
Feature selection for tandem mass spectrum quality assessment
J Ding, J Shi, AM Zou, FX Wu
2008 IEEE International Conference on Bioinformatics and Biomedicine, 310-313, 2008
62008
Effects of input data quantity on genome-wide association studies (GWAS)
Y Yan, C Burbridge, J Shi, J Liu, A Kusalik
International Journal of Data Mining and Bioinformatics 22 (1), 19-43, 2019
42019
A feedback framework for protein inference with peptides identified from tandem mass spectra
J Shi, FX Wu
Proteome Science 10 (1), 1-11, 2012
42012
Comparing four genome-wide association study (gwas) programs with varied input data quantity
Y Yan, C Burbridge, J Shi, J Liu, A Kusalik
2018 IEEE international conference on bioinformatics and biomedicine (BIBM …, 2018
32018
Protein inference based on peptides identified from tandem mass spectra
J Shi
University of Saskatchewan, 2012
32012
Improve accuracy of peptide identification with consistency between peptides
J Shi, B Chen, FX Wu
2011 IEEE International Conference on Bioinformatics and Biomedicine, 191-196, 2011
32011
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Articles 1–20