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Chris Thachuk
Chris Thachuk
Computer Science & Engineering, University of Washington
E-mailová adresa ověřena na: cs.washington.edu - Domovská stránka
Název
Citace
Citace
Rok
Core Hunter: an algorithm for sampling genetic resources based on multiple genetic measures
C Thachuk, J Crossa, J Franco, S Dreisigacker, M Warburton, ...
BMC bioinformatics 10, 1-13, 2009
1412009
A replica exchange Monte Carlo algorithm for protein folding in the HP model
C Thachuk, A Shmygelska, HH Hoos
BMC bioinformatics 8, 1-20, 2007
1332007
Effective design principles for leakless strand displacement systems
B Wang, C Thachuk, AD Ellington, E Winfree, D Soloveichik
Proceedings of the National Academy of Sciences 115 (52), E12182-E12191, 2018
1212018
DNA walker circuits: computational potential, design, and verification
F Dannenberg, M Kwiatkowska, C Thachuk, AJ Turberfield
Natural Computing 14, 195-211, 2015
932015
Compiler-aided systematic construction of large-scale DNA strand displacement circuits using unpurified components
AJ Thubagere, C Thachuk, J Berleant, RF Johnson, DA Ardelean, ...
Nature Communications 8 (1), 14373, 2017
912017
Leakless DNA strand displacement systems
C Thachuk, E Winfree, D Soloveichik
DNA Computing and Molecular Programming: 21st International Conference, DNA …, 2015
882015
Absolute and arbitrary orientation of single-molecule shapes
A Gopinath, C Thachuk, A Mitskovets, HA Atwater, D Kirkpatrick, ...
Science 371 (6531), eabd6179, 2021
652021
Stochastic simulation of the kinetics of multiple interacting nucleic acid strands
JM Schaeffer, C Thachuk, E Winfree
DNA Computing and Molecular Programming: 21st International Conference, DNA …, 2015
572015
A general-purpose CRN-to-DSD compiler with formal verification, optimization, and simulation capabilities
S Badelt, SW Shin, RF Johnson, Q Dong, C Thachuk, E Winfree
DNA Computing and Molecular Programming: 23rd International Conference, DNA …, 2017
482017
Space and energy efficient computation with DNA strand displacement systems
C Thachuk, A Condon
International Workshop on DNA-Based Computers, 135-149, 2012
442012
NP-completeness of the energy barrier problem without pseudoknots and temporary arcs
J Maňuch, C Thachuk, L Stacho, A Condon
Natural Computing 10, 391-405, 2011
41*2011
Probabilistic model checking for biology
M Kwiatkowska, C Thachuk
Software Systems Safety, 165-189, 2014
322014
Less haste, less waste: on recycling and its limits in strand displacement systems
A Condon, AJ Hu, J Maňuch, C Thachuk
Interface Focus 2 (4), 512-521, 2012
302012
Verifying chemical reaction network implementations: A pathway decomposition approach
SW Shin, C Thachuk, E Winfree
Theoretical Computer Science 765, 67-96, 2019
282019
An algorithm for the energy barrier problem without pseudoknots and temporary arcs
C Thachuk, J Maňuch, A Rafiey, LA Mathieson, L Stacho, A Condon
Biocomputing 2010, 108-119, 2010
262010
Fast algorithmic self-assembly of simple shapes using random agitation
HL Chen, D Doty, D Holden, C Thachuk, D Woods, CT Yang
DNA Computing and Molecular Programming: 20th International Conference, DNA …, 2014
202014
Thermodynamic binding networks
D Doty, TA Rogers, D Soloveichik, C Thachuk, D Woods
DNA Computing and Molecular Programming: 23rd International Conference, DNA …, 2017
192017
Indexing hypertext
C Thachuk
Journal of Discrete Algorithms 18, 113-122, 2013
192013
The complexity of string partitioning
A Condon, J Maňuch, C Thachuk
Journal of Discrete Algorithms 32, 24-43, 2015
182015
Complexity of a collision-aware string partition problem and its relation to oligo design for gene synthesis
A Condon, J Maňuch, C Thachuk
Computing and Combinatorics: 14th Annual International Conference, COCOON …, 2008
142008
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Články 1–20