Juilee Thakar
Juilee Thakar
Associate Professor of Microbiology & Immunology, Biomedical Genetics and Biostatistics
Verified email at urmc.rochester.edu - Homepage
Cited by
Cited by
Boolean network simulations for life scientists
I Albert, J Thakar, S Li, R Zhang, R Albert
Source code for biology and medicine 3 (1), 1-8, 2008
Modeling systems-level regulation of host immune responses
J Thakar, M Pilione, G Kirimanjeswara, ET Harvill, R Albert
PLoS computational biology 3 (6), e109, 2007
Quantitative set analysis for gene expression: a method to quantify gene set differential expression including gene-gene correlations
G Yaari, CR Bolen, J Thakar, SH Kleinstein
Nucleic acids research 41 (18), e170-e170, 2013
Boolean modeling: a logic‐based dynamic approach for understanding signaling and regulatory networks and for making useful predictions
R Albert, J Thakar
Wiley Interdisciplinary Reviews: Systems Biology and Medicine 6 (5), 353-369, 2014
Generating super-shedders: co-infection increases bacterial load and egg production of a gastrointestinal helminth
S Lass, PJ Hudson, J Thakar, J Saric, E Harvill, R Albert, SE Perkins
Journal of The Royal Society Interface 10 (80), 20120588, 2013
Systems-level insights into cellular regulation: inferring, analysing, and modelling intracellular networks
C Christensen, J Thakar, R Albert
IET systems biology 1 (2), 61-77, 2007
Nectarless flowers: ecological correlates and evolutionary stability
JD Thakar, K Kunte, AK Chauhan, AV Watve, MG Watve
Oecologia 136 (4), 565-570, 2003
Bee-eaters (Merops orientalis) respond to what a predator can see
M Watve, J Thakar, A Kale, S Puntambekar, I Shaikh, K Vaze, M Jog, ...
Animal Cognition 5 (4), 253-259, 2002
Network Model of Immune Responses Reveals Key Effectors to Single and Co-infection Dynamics by a Respiratory Bacterium and a Gastrointestinal Helminth
J Thakar, AK Pathak, L Murphy, R Albert, IM Cattadori
PLoS Computational Biology 8 (1), e1002345, 2012
Aging-dependent alterations in gene expression and a mitochondrial signature of responsiveness to human influenza vaccination
J Thakar, S Mohanty, AP West, SR Joshi, I Ueda, J Wilson, H Meng, ...
Aging (Albany NY) 7 (1), 38, 2015
Constraint-based network model of pathogen–immune system interactions
J Thakar, A Saadatpour-Moghaddam, ET Harvill, R Albert
Journal of The Royal Society Interface 6 (36), 599-612, 2009
Computational and experimental analysis reveals a requirement for eosinophil-derived IL-13 for the development of allergic airway responses in C57BL/6 mice
ER Walsh, J Thakar, K Stokes, F Huang, R Albert, A August
The Journal of Immunology 186 (5), 2936-2949, 2011
Human dendritic cell response signatures distinguish 1918, pandemic, and seasonal H1N1 influenza viruses
BM Hartmann, J Thakar, RA Albrecht, S Avey, E Zaslavsky, N Marjanovic, ...
Journal of virology 89 (20), 10190-10205, 2015
Boolean models of within-host immune interactions
J Thakar, R Albert
Current opinion in microbiology 13 (3), 377-381, 2010
Immune Markers Associated with Host Susceptibility to Infection with West Nile Virus
F Qian, J Thakar, X Yuan, M Nolan, KO Murray, WT Lee, SJ Wong, ...
Viral Immunology 27 (2), 39-47, 2014
Dynamic models of immune responses: what is the ideal level of detail?
J Thakar, M Poss, R Albert, GH Long, R Zhang
Theoretical Biology and Medical Modelling 7 (1), 1-7, 2010
MicroRNAs as novel biomarkers of deployment status and exposure to polychlorinated dibenzo-p-dioxins/dibenzofurans
CF Woeller, TH Thatcher, D Van Twisk, SJ Pollock, A Croadsdell, ...
Journal of occupational and environmental medicine/American College of …, 2016
RIP death domain structural interactions implicated in TNF‐mediated proliferation and survival
J Thakar, K Schleinkofer, C Borner, T Dandekar
Proteins: Structure, Function, and Bioinformatics 63 (3), 413-423, 2006
FUNNEL-GSEA: FUNctioNal ELastic-net regression in time-course gene set enrichment analysis
Y Zhang, DJ Topham, J Thakar, X Qiu
Bioinformatics 33 (13), 1944-1952, 2017
Humoral dysregulation associated with increased systemic inflammation among injection heroin users
MS Piepenbrink, M Samuel, B Zheng, B Carter, C Fucile, C Bunce, ...
PLoS One 11 (7), e0158641, 2016
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