| A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3 P Cingolani, AE Platts, LL Wang, M Coon, T Nguyen, L Wang, SJ Land, ... Fly 6 (2), 80-92, 2012 | 10688 | 2012 |
| The butterfly plant arms-race escalated by gene and genome duplications PP Edger, HM Heidel-Fischer, M Bekaert, J Rota, G Glöckner, AE Platts, ... Proceedings of the National Academy of Sciences 112 (27), 8362-8366, 2015 | 496 | 2015 |
| The Capsella rubella genome and the genomic consequences of rapid mating system evolution T Slotte, KM Hazzouri, JA Ågren, D Koenig, F Maumus, YL Guo, K Steige, ... Nature genetics 45 (7), 831-835, 2013 | 434 | 2013 |
| An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions A Haudry, AE Platts, E Vello, DR Hoen, M Leclercq, RJ Williamson, ... Nature genetics 45 (8), 891-898, 2013 | 396 | 2013 |
| Endonuclease-sensitive regions of human spermatozoal chromatin are highly enriched in promoter and CTCF binding sequences A Arpanahi, M Brinkworth, D Iles, SA Krawetz, A Paradowska, AE Platts, ... Genome research 19 (8), 1338-1349, 2009 | 346 | 2009 |
| Success and failure in human spermatogenesis as revealed by teratozoospermic RNAs AE Platts, DJ Dix, HE Chemes, KE Thompson, R Goodrich, JC Rockett, ... Human molecular genetics 16 (7), 763-773, 2007 | 292 | 2007 |
| The rice paradox: multiple origins but single domestication in Asian rice JY Choi, AE Platts, DQ Fuller, YI Hsing, RA Wing, MD Purugganan Molecular biology and evolution 34 (4), 969-979, 2017 | 257 | 2017 |
| Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower PP Edger, R Smith, MR McKain, AM Cooley, M Vallejo-Marin, Y Yuan, ... The Plant Cell 29 (9), 2150-2167, 2017 | 238 | 2017 |
| Hybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris GM Douglas, G Gos, KA Steige, A Salcedo, K Holm, EB Josephs, ... Proceedings of the National Academy of Sciences 112 (9), 2806-2811, 2015 | 157 | 2015 |
| Evidence for widespread positive and negative selection in coding and conserved noncoding regions of Capsella grandiflora RJ Williamson, EB Josephs, AE Platts, KM Hazzouri, A Haudry, ... PLOS Genetics 10 (9), e1004622, 2014 | 140 | 2014 |
| Identification of human sperm transcripts as candidate markers of male fertility C Lalancette, AE Platts, GD Johnson, BR Emery, DT Carrell, SA Krawetz Journal of molecular medicine 87, 735-748, 2009 | 109 | 2009 |
| The strength and pattern of natural selection on gene expression in rice SC Groen, I Ćalić, Z Joly-Lopez, AE Platts, JY Choi, M Natividad, K Dorph, ... Nature 578 (7796), 572-576, 2020 | 108 | 2020 |
| Differential nuclear scaffold/matrix attachment marks expressed genes AK Linnemann, AE Platts, SA Krawetz Human molecular genetics 18 (4), 645-654, 2009 | 80 | 2009 |
| Evolutionary history and pan-genome dynamics of strawberry (Fragaria spp.) Q Qiao, PP Edger, L Xue, L Qiong, J Lu, Y Zhang, Q Cao, AE Yocca, ... Proceedings of the National Academy of Sciences 118 (45), e2105431118, 2021 | 73 | 2021 |
| Secondary evolution of a self-incompatibility locus in the Brassicaceae genus Leavenworthia SC Chantha, AC Herman, AE Platts, X Vekemans, DJ Schoen PLOS Biology 11 (5), e1001560, 2013 | 70 | 2013 |
| A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff. Fly (Austin)., 6 (2), 80–92 P Cingolani, A Platts, LL Wang, M Coon, T Nguyen, L Wang, SJ Land, ... | 52* | 2012 |
| Improvement in the cast structure of Sm(2)Fe(17) alloys by niobium additions AE Platts, IR Harris, JMD Coey Journal of alloys and compounds 185 (2), 251-258, 1992 | 45 | 1992 |
| Blueprint for Phasing and Assembling the Genomes of Heterozygous Polyploids: Application to the Octoploid Genome of Strawberry MA Hardigan, MJ Feldmann, DD Pincot, RA Famula, MV Vachev, ... bioRxiv, 2021 | 41 | 2021 |
| Real-time PCR quantification using a variable reaction efficiency model AE Platts, GD Johnson, AK Linnemann, SA Krawetz Analytical biochemistry 380 (2), 315-322, 2008 | 40 | 2008 |
| Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex D Ottaviani, E Lever, R Mitter, T Jones, T Forshew, R Christova, ... Genome research 18 (11), 1778-1786, 2008 | 38 | 2008 |
stephen krawetzDept Ob/Gyn & Mol. Med. & Genomics WSU SOMVerified email at compbio.med.wayne.edu
