| Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ... Nature medicine 25 (4), 679-689, 2019 | 571 | 2019 |
| Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019 | 461 | 2019 |
| Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3 F Beghini, LJ McIver, A Blanco-Míguez, L Dubois, F Asnicar, S Maharjan, ... | 412 | 2020 |
| Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals F Asnicar, SE Berry, AM Valdes, LH Nguyen, G Piccinno, DA Drew, ... Nature Medicine, 1-12, 2021 | 312 | 2021 |
| Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0 F Asnicar, AM Thomas, F Beghini, C Mengoni, S Manara, P Manghi, ... Nature communications 11 (1), 2500, 2020 | 218 | 2020 |
| Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics LP Antunes, LF Martins, RV Pereira, AM Thomas, D Barbosa, LN Lemos, ... Scientific Reports 6, 2016 | 184 | 2016 |
| Butyrate Protects Mice from Clostridium difficile-Induced Colitis through an HIF-1-Dependent Mechanism JL Fachi, J de Souza Felipe, LP Pral, BK da Silva, RO Corrêa, ... Cell Reports 27 (3), 750-761. e7, 2019 | 182 | 2019 |
| Tissue-associated bacterial alterations in rectal carcinoma patients revealed by 16S rRNA community profiling AM Thomas, EC de Jesus, A Lopes, S Aguiar Junior, MD Begnami, ... Frontiers in Cellular and Infection Microbiology 6, 179, 2016 | 113 | 2016 |
| A global metagenomic map of urban microbiomes and antimicrobial resistance D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ... Cell 184 (13), 3376-3393. e17, 2021 | 106 | 2021 |
| Multiple levels of the unknown in microbiome research AM Thomas, N Segata BMC biology 17 (1), 48, 2019 | 98 | 2019 |
| Alcohol and tobacco consumption affects bacterial richness in oral cavity mucosa biofilms AM Thomas, FO Gleber-Netto, GR Fernandes, M Amorim, LF Barbosa, ... BMC microbiology 14 (1), 1, 2014 | 79 | 2014 |
| Intestinal Akkermansia muciniphila predicts clinical response to PD-1 blockade in patients with advanced non-small-cell lung cancer L Derosa, B Routy, AM Thomas, V Iebba, G Zalcman, S Friard, J Mazieres, ... Nature Medicine 28 (2), 315-324, 2022 | 64 | 2022 |
| Faecal microbiota transplantation for the treatment of diarrhoea induced by tyrosine-kinase inhibitors in patients with metastatic renal cell carcinoma G Ianiro, E Rossi, AM Thomas, G Schinzari, L Masucci, G Quaranta, ... Nature communications 11 (1), 4333, 2020 | 61 | 2020 |
| Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma KA Lee, AM Thomas, LA Bolte, JR Björk, LK de Ruijter, F Armanini, ... Nature Medicine 28 (3), 535-544, 2022 | 58 | 2022 |
| Altered Fecal Small RNA Profiles in Colorectal Cancer Reflect Gut Microbiome Composition in Stool Samples S Tarallo, G Ferrero, G Gallo, A Francavilla, G Clerico, AR Luc, P Manghi, ... mSystems 4 (5), e00289-19, 2019 | 48 | 2019 |
| Intestinal microbiota influences clinical outcome and side effects of early breast cancer treatment S Terrisse, L Derosa, V Iebba, F Ghiringhelli, I Vaz-Luis, G Kroemer, ... Cell Death & Differentiation 28 (9), 2778-2796, 2021 | 45 | 2021 |
| Gut microbiota profile of obese diabetic women submitted to Roux-en-Y gastric bypass and its association with food intake and postoperative diabetes remission K Al Assal, E Prifti, E Belda, P Sala, K Clément, MC Dao, J Doré, ... Nutrients 12 (2), 278, 2020 | 39 | 2020 |
| Prophylactic Supplementation of Bifidobacterium longum 51A Protects Mice from Ovariectomy-Induced Exacerbated Allergic Airway Inflammation and Airway Hyperresponsiveness E Mendes, BG Acetturi, AM Thomas, FS Martins, AR Crisma, G Murata, ... Frontiers in Microbiology 8, 1732, 2017 | 29 | 2017 |
| Tributyrin Attenuates Metabolic and Inflammatory Changes Associated with Obesity through a GPR109A-Dependent Mechanism FT Sato, YA Yap, AR Crisma, M Portovedo, GM Murata, SM Hirabara, ... Cells 9 (9), 2007, 2020 | 17 | 2020 |
| Deletion and low expression of NFKBIA are associated with poor prognosis in lower-grade glioma patients GS Kinker, AM Thomas, VJ Carvalho, FP Lima, A Fujita Scientific Reports 6, 2016 | 15 | 2016 |
João Carlos SetubalProfessor of Bioinformatics, University of Sao PauloVerified email at iq.usp.br
