Joseph A. White
Joseph A. White
Dana-Farber Cancer Institute
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TM4: a free, open-source system for microarray data management and analysis
AI Saeed, V Sharov, J White, J Li, W Liang, N Bhagabati, J Braisted, ...
Biotechniques 34 (2), 374-378, 2003
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
G Pertea, X Huang, F Liang, V Antonescu, R Sultana, S Karamycheva, ...
Bioinformatics 19 (5), 651-652, 2003
[9] TM4 microarray software suite
AI Saeed, NK Bhagabati, JC Braisted, W Liang, V Sharov, EA Howe, J Li, ...
Methods in enzymology 411, 134-193, 2006
Design and implementation of microarray gene expression markup language (MAGE-ML)
PT Spellman, M Miller, J Stewart, C Troup, U Sarkans, S Chervitz, ...
Genome biology 3 (9), 1-9, 2002
The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species
J Quackenbush, J Cho, D Lee, F Liang, I Holt, S Karamycheva, B Parvizi, ...
Nucleic Acids Research 29 (1), 159-164, 2001
Within the fold: assessing differential expression measures and reproducibility in microarray assays
IV Yang, E Chen, JP Hasseman, W Liang, BC Frank, S Wang, V Sharov, ...
Genome biology 3, 1-13, 2002
Microarray analysis of developing Arabidopsis seeds
T Girke, J Todd, S Ruuska, J White, C Benning, J Ohlrogge
Plant Physiology 124 (4), 1570-1581, 2000
Azithromycin in patients admitted to hospital with COVID-19 (RECOVERY): a randomised, controlled, open-label, platform trial
RECOVERY Collaborative Group
Lancet (London, England) 397 (10274), 605, 2021
A new set of Arabidopsis expressed sequence tags from developing seeds. The metabolic pathway from carbohydrates to seed oil
JA White, J Todd, T Newman, N Focks, T Girke, OM de Ilárduya, ...
Plant physiology 124 (4), 1582-1594, 2000
Comprehensive EST analysis of tomato and comparative genomics of fruit ripening
Z Fei, X Tang, RM Alba, JA White, CM Ronning, GB Martin, SD Tanksley, ...
The Plant Journal 40 (1), 47-59, 2004
The MGED Ontology: a resource for semantics-based description of microarray experiments
PL Whetzel, H Parkinson, HC Causton, L Fan, J Fostel, G Fragoso, ...
Bioinformatics 22 (7), 866-873, 2006
Differential expression of two genes for 1-aminocyclopropane-1-carboxylate synthase in tomato fruits.
DC Olson, JA White, L Edelman, RN Harkins, H Kende
Proceedings of the National Academy of Sciences 88 (12), 5340-5344, 1991
Comparative analyses of potato expressed sequence tag libraries
CM Ronning, SS Stegalkina, RA Ascenzi, O Bougri, AL Hart, TR Utterbach, ...
Plant Physiology 131 (2), 419-429, 2003
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
TF Rayner, P Rocca-Serra, PT Spellman, HC Causton, A Farne, ...
BMC bioinformatics 7, 1-18, 2006
Effects of fluoxetine on functional outcomes after acute stroke (FOCUS): a pragmatic, double-blind, randomised, controlled trial
M Dennis, G Mead, J Forbes, C Graham, M Hackett, GJ Hankey, A House, ...
The Lancet 393 (10168), 265-274, 2019
Cross-referencing eukaryotic genomes: TIGR orthologous gene alignments (TOGA)
Y Lee, R Sultana, G Pertea, J Cho, S Karamycheva, J Tsai, B Parvizi, ...
Genome Research 12 (3), 493-502, 2002
Clinical evaluation of glimepiride versus glyburide in NIDDM in a double-blind comparative study
DG Dills, J Schneider, null The Glimepiride/Glyburide Research Group
Hormone and metabolic research 28 (09), 426-429, 1996
Transcriptome analyses of the human retina identify unprecedented transcript diversity and 3.5 Mb of novel transcribed sequence via significant alternative splicing and novel genes
MH Farkas, GR Grant, JA White, ME Sousa, MB Consugar, EA Pierce
BMC genomics 14, 1-14, 2013
Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue
DT Chen, A Nasir, A Culhane, C Venkataramu, W Fulp, R Rubio, T Wang, ...
Breast cancer research and treatment 119, 335-346, 2010
Sleep electroencephalogram delta-frequency amplitude, night plasma levels of tumor necrosis factor alpha, and human immunodeficiency virus infection.
DF Darko, JC Miller, C Gallen, J White, J Koziol, SJ Brown, R Hayduk, ...
Proceedings of the National Academy of Sciences 92 (26), 12080-12084, 1995
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