Peng Qiu

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Sylvia K. PlevritisProfessor of Biomedical Data Science, Stanford UniversityVerified email at stanford.edu
Garry NolanProfessor of Pathology, Stanford UniversityVerified email at stanford.edu
Hong Seo LimIntuitive SurgicalVerified email at gatech.edu
Erin F. SimondsDirector at Soteria BiotherapeuticsVerified email at soteriabiotx.com
Sean BendallStanford UniversityVerified email at stanford.edu
Congmin XuBioMap (Beijing) Intelligent Technology Co., Ltd.Verified email at biomap.com
Yuan Ji, PhDThe University of ChicagoVerified email at uchicago.edu
K. J. Ray LiuOrigin ResearchVerified email at ieee.org
Edward BotchweyWallace H Coulter Dept of Biomedical Engineering at Georgia Tech and Emory UniversityVerified email at bme.gatech.edu
Scott D Tannerretired - University of Toronto, DVS Sciences, SciexVerified email at utoronto.ca
Nima AghaeepourStanford UniversityVerified email at stanford.edu
Richard H. ScheuermannJ. Craig Venter InstituteVerified email at jcvi.org
Ryan BrinkmanBritish Columbia Cancer AgencyVerified email at bccrc.ca
Greg FinakCTO, Ozette TechnologiesVerified email at ozette.ai
Z. Jane WangProfessor of Electrical and Computer Engineering Dept., University of British Columbia, CanadaVerified email at ece.ubc.ca
Michael LindermanAssociate Professor of Computer Science, Middlebury CollegeVerified email at middlebury.edu
Mark TranstrumAssociate Professor of Physics at Brigham Young UniversityVerified email at byu.edu
Lauren A. HymelGeorgia Institute of Technology, Emory UniversityVerified email at gatech.edu
Todd SulchekGeorgia Tech and CellFEVerified email at me.gatech.edu
TJ Cradick#CRISPR Consulting https://geneeditingfrontiers.comVerified email at alum.mit.edu

Peng Qiu

Georgia Institute of Technology

Verified email at bme.gatech.edu - Homepage

Bioinformatics and Computational Biology


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Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum SC Bendall, EF Simonds, P Qiu, ED Amir, PO Krutzik, R Finck, ... Science 332 (6030), 687-696, 2011	2532	2011
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE P Qiu, EF Simonds, SC Bendall, KD Gibbs Jr, RV Bruggner, ... Nature Biotechnology, 2011	1076	2011
A community effort to assess and improve drug sensitivity prediction algorithms JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ... Nature biotechnology 32 (12), 1202, 2014	817	2014
Data-analysis strategies for image-based cell profiling. JC Caicedo, S Cooper, F Heigwer, S Warchal, P Qiu, C Molnar, ... Nature methods 14 (9), 849, 2017	717	2017
Critical assessment of automated flow cytometry data analysis techniques N Aghaeepour, G Finak, H Hoos, TR Mosmann, R Brinkman, R Gottardo, ... Nature Methods, 2013	687	2013
COSMID: a web-based tool for identifying and validating CRISPR/Cas off-target sites TJ Cradick, P Qiu, CM Lee, EJ Fine, G Bao Molecular Therapy-Nucleic Acids 3, 2014	435	2014
TCGA-assembler: open-source software for retrieving and processing TCGA data Y Zhu, P Qiu, Y Ji Nature methods 11 (6), 599-600, 2014	411	2014
Embracing the dropouts in single-cell RNA-seq analysis P Qiu Nature communications 11 (1), 1169, 2020	384	2020
A community computational challenge to predict the activity of pairs of compounds M Bansal, J Yang, C Karan, MP Menden, JC Costello, H Tang, G Xiao, ... Nature biotechnology 32 (12), 1213, 2014	343	2014
Aging progression of human gut microbiota C Xu, H Zhu, P Qiu BMC microbiology 19, 1-10, 2019	233	2019
Correlation Patterns Between DNA Methylation and Gene Expression in The Cancer Genome Atlas JCG Spainhour, HS Lim, SV Yi, P Qiu Cancer Informatics 18, 1176935119828776, 2019	188	2019
Novel BET protein proteolysis-targeting chimera exerts superior lethal activity than bromodomain inhibitor (BETi) against post-myeloproliferative neoplasm secondary (s) AML cells DT Saenz, W Fiskus, Y Qian, T Manshouri, K Rajapakshe, K Raina, ... Leukemia, 2017	185	2017
Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data F Rubelt, CE Busse, SAC Bukhari, JP Bürckert, E Mariotti-Ferrandiz, ... Nature immunology 18 (12), 1274-1278, 2017	182	2017
Spanning-tree progression analysis of density-normalized events (SPADE) QIU Peng, AJ Gentles, SK Plevritis, G Nolan, K Sachs US Patent 10,289,802, 2019	178*	2019
PSGL-1/Selectin and ICAM-1/CD18 interactions are involved in macrophage-induced drug resistance in myeloma Y Zheng, J Yang, J Qian, P Qiu, S Hanabuchi, Y Lu, Z Wang, Z Liu, H Li, ... Leukemia, 2012	161	2012
Model Reduction by Manifold Boundaries MK Transtrum, P Qiu Physical Review Letters 113 (9), 098701, 2014	152	2014
Visualization and cellular hierarchy inference of single-cell data using SPADE B Anchang, TDP Hart, SC Bendall, P Qiu, Z Bjornson, M Linderman, ... Nature protocols 11 (7), 1264-1279, 2016	124	2016
Individual Motile CD4⁺ T Cells Can Participate in Efficient Multikilling through Conjugation to Multiple Tumor Cells I Liadi, H Singh, G Romain, N Rey-Villamizar, A Merouane, ... Cancer immunology research 3 (5), 473-482, 2015	118	2015
Single‐cell mass cytometry reveals intracellular survival/proliferative signaling in FLT3‐ITD‐mutated AML stem/progenitor cells L Han, P Qiu, Z Zeng, JL Jorgensen, DH Mak, JK Burks, W Schober, ... Cytometry Part A 87 (4), 346-356, 2015	104	2015
AD Amir el, PO Krutzik, R SC Bendall, EF Simonds, P Qiu Finck, RV Bruggner, R. Melamed, A. Trejo, OI Ornatsky, RS Balderas, SK …, 2011	98	2011

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