| SOM-hunter: video browsing with relevance-to-SOM feedback loop M Kratochvíl, P Veselý, F Mejzlík, J Lokoč MultiMedia Modeling: 26th International Conference, MMM 2020, Daejeon, South …, 2020 | 64 | 2020 |
| Sachem: a chemical cartridge for high-performance substructure search M Kratochvíl, J Vondrášek, J Galgonek Journal of cheminformatics 10, 1-11, 2018 | 30 | 2018 |
| Detailed analysis and optimization of CUDA k-means algorithm M Kruliš, M Kratochvíl Proceedings of the 49th International Conference on Parallel Processing, 1-11, 2020 | 24 | 2020 |
| Somhunter for lifelog search F Mejzlík, P Veselý, M Kratochvíl, T Souček, J Lokoč Proceedings of the Third Annual Workshop on Lifelog Search Challenge, 73-75, 2020 | 24 | 2020 |
| SOMHunter: Lightweight Video Search System with SOM-Guided Relevance Feedback M Kratochvíl, F Mejzlík, P Veselý, T Souček, J Lokoč Proceedings of the 28th ACM International Conference on Multimedia, 4481-4484, 2020 | 22 | 2020 |
| Interoperable chemical structure search service M Kratochvíl, J Vondrášek, J Galgonek Journal of cheminformatics 11, 1-7, 2019 | 19 | 2019 |
| On the user-centric comparative remote evaluation of interactive video search systems L Rossetto, R Gasser, S Heller, M Parian-Scherb, L Sauter, F Spiess, ... IEEE MultiMedia 28 (4), 18-28, 2021 | 18 | 2021 |
| Generalized EmbedSOM on quadtree-structured self-organizing maps M Kratochvíl, A Koladiya, J Vondrášek F1000Research 8, 2120, 2020 | 18 | 2020 |
| ShinySOM: graphical SOM-based analysis of single-cell cytometry data M Kratochvíl, D Bednárek, T Sieger, K Fišer, J Vondrášek Bioinformatics 36 (10), 3288-3289, 2020 | 15 | 2020 |
| GigaSOM. jl: High-performance clustering and visualization of huge cytometry datasets M Kratochvíl, O Hunewald, L Heirendt, V Verissimo, J Vondrášek, ... GigaScience 9 (11), giaa127, 2020 | 13 | 2020 |
| Interrogating the effect of enzyme kinetics on metabolism using differentiable constraint-based models M Besançon, M Kratochvíl, CAF Kuate, C Trefois, W Gu, O Ebenhöh Metabolic engineering 74, 72-82, 2022 | 12 | 2022 |
| COBREXA. jl: constraint-based reconstruction and exascale analysis M Kratochvíl, L Heirendt, SE Wilken, T Pusa, S Arreckx, A Noronha, ... Bioinformatics 38 (4), 1171-1172, 2022 | 12 | 2022 |
| SOM-based embedding improves efficiency of high-dimensional cytometry data analysis M Kratochvıl biorxiv, 2019 | 10 | 2019 |
| Implementation of cryptosystem based on error-correcting codes M Kratochvíl Univerzita Karlova, Matematicko-fyzikální fakulta, 2013 | 8 | 2013 |
| SOM-based embedding improves efficiency of high-dimensional cytometry data analysis. bioRxiv. 2019 M Kratochvíl, A Koladiya, J Balounova, V Novosadova, R Sedlacek, ... Publisher Full Text, 0 | 6 | |
| Widespread evolutionary crosstalk among protein domains in the context of multi-domain proteins D Jakubec, M Kratochvíl, J Vymĕtal, J Vondrášek Plos one 13 (8), e0203085, 2018 | 4 | 2018 |
| Frog analysis ensures the reproducibility of genome scale metabolic models K Raman, M Kratochvil, BG Olivier, M König, P Sengupta, ... bioRxiv, 2024.09. 24.614797, 2024 | 3 | 2024 |
| Astute approach to handling memory layouts of regular data structures A Šmelko, M Kruliš, M Kratochvíl, J Klepl, J Mayer, P Šimůnek International Conference on Algorithms and Architectures for Parallel …, 2022 | 3 | 2022 |
| Translational challenges of biomedical machine learning solutions in clinical and laboratory settings C Vega, M Kratochvil, V Satagopam, R Schneider International Work-Conference on Bioinformatics and Biomedical Engineering …, 2022 | 3 | 2022 |
| 5β-reduced neuroactive steroids as modulators of growth and viability of postnatal neurons and glia MM Cheema, ZM Kotrbova, BH Krausova, SK Adla, B Slavikova, ... The Journal of Steroid Biochemistry and Molecular Biology 239, 106464, 2024 | 2 | 2024 |
