Ci Chu
Ci Chu
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Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions
C Chu, K Qu, FL Zhong, SE Artandi, HY Chang
Molecular cell 44 (4), 667-678, 2011
Control of somatic tissue differentiation by the long non-coding RNA TINCR
M Kretz, Z Siprashvili, C Chu, DE Webster, A Zehnder, K Qu, CS Lee, ...
Nature 493 (7431), 231-235, 2013
Systematic discovery of Xist RNA binding proteins
C Chu, QC Zhang, ST Da Rocha, RA Flynn, M Bharadwaj, JM Calabrese, ...
Cell 161 (2), 404-416, 2015
Chromatin isolation by RNA purification (ChIRP)
C Chu, J Quinn, HY Chang
JoVE (Journal of Visualized Experiments), e3912, 2012
Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification
JJ Quinn, IA Ilik, K Qu, P Georgiev, C Chu, A Akhtar, HY Chang
Nature biotechnology 32 (9), 933-940, 2014
Technologies to probe functions and mechanisms of long noncoding RNAs
C Chu, RC Spitale, HY Chang
Nature structural & molecular biology 22 (1), 29-35, 2015
7SK-BAF axis controls pervasive transcription at enhancers
RA Flynn, BT Do, AJ Rubin, E Calo, B Lee, H Kuchelmeister, M Rale, ...
Nature structural & molecular biology 23 (3), 231-238, 2016
The transcription factor Zfp281 controls embryonic stem cell pluripotency by direct activation and repression of target genes
ZX Wang, CHL Teh, CMY Chan, C Chu, M Rossbach, G Kunarso, ...
Stem Cells 26 (11), 2791-2799, 2008
Understanding RNA-Chromatin Interactions Using Chromatin Isolation by RNA Purification (ChIRP)
C Chu, HY Chang
Polycomb Group Proteins: Methods and Protocols, 115-123, 2016
ChIRP-MS: RNA-directed proteomic discovery
C Chu, HY Chang
X-Chromosome Inactivation: Methods and Protocols, 37-45, 2018
PIRCh-seq: functional classification of non-coding RNAs associated with distinct histone modifications
J Fang, Q Ma, C Chu, B Huang, L Li, P Cai, PJ Batista, KEM Tolentino, ...
Genome biology 20 (1), 1-21, 2019
RNA interactome analysis
HYH Chang, C Chu
US Patent 8,748,354, 2014
Dissection of multiple sclerosis genetics identifies B and CD4+ T cells as driver cell subsets
MH Guo, P Sama, BA LaBarre, H Lokhande, J Balibalos, C Chu, X Du, ...
Genome Biology 23 (1), 1-23, 2022
Functional classification of noncoding RNAs associated with distinct histone modifications by PIRCh-seq
J Fang, Q Ma, C Chu, B Huang, L Li, P Cai, PJ Batista, KEM Tolentino, ...
bioRxiv, 667881, 2019
ChIRP: RNA Interactome Analysis
C Chu
Stanford University, 2014
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