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Petr Škoda
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PrankWeb: a web server for ligand binding site prediction and visualization
L Jendele, R Krivak, P Skoda, M Novotny, D Hoksza
Nucleic acids research 47 (W1), W345-W349, 2019
1072019
Molpher: a software framework for systematic chemical space exploration
D Hoksza, P Škoda, M Voršilák, D Svozil
J Cheminform 3, 32, 2014
382014
LinkedPipes ETL: Evolved linked data preparation
J Klímek, P Škoda, M Nečaský
European Semantic Web Conference, 95-100, 2016
332016
Survey of tools for Linked Data consumption
J Klímek, P Škoda, M Nečaský
Semantic Web 10 (4), 665-720, 2019
312019
UnifiedViews: an ETL framework for sustainable RDF data processing
T Knap, M Kukhar, B Macháč, P Škoda, J Tomeš, J Vojt
European Semantic Web Conference, 379-383, 2014
272014
PDBe-KB: a community-driven resource for structural and functional annotations
M Varadi, J Berrisford, M Deshpande, SS Nair, A Gutmanas, D Armstrong, ...
Nucleic Acids Research, 2019
222019
UnifiedViews: Towards ETL Tool for Simple yet Powerfull RDF Data Management⋆
T Knap, P Škoda, J Klımek, M Necaský
222015
UnifiedViews: an ETL tool for RDF data management
T Knap, P Hanečák, J Klímek, C Mader, M Nečaský, B Van Nuffelen, ...
Semantic Web 9 (5), 661-676, 2018
162018
LinkedPipes ETL in use: practical publication and consumption of linked data
J Klímek, P Škoda
Proceedings of the 19th International Conference on Information Integration …, 2017
112017
Benchmarking platform for ligand-based virtual screening
P Škoda, D Hoksza
2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2016
92016
Requirements on Linked Data Consumption Platform.
J Klímek, P Skoda, M Necaský
LDOW@ WWW, 2016
92016
PDBe-KB: collaboratively defining the biological context of structural data
Nucleic acids research 50 (D1), D534-D542, 2022
72022
Utilizing knowledge base of amino acids structural neighborhoods to predict protein-protein interaction sites
J Jelínek, P Škoda, D Hoksza
Computational Advances in Bio and Medical Sciences (ICCABS), 2016 IEEE 6th …, 2016
72016
Exploration of topological torsion fingerprints
P Skoda, D Hoksza
Bioinformatics and Biomedicine (BIBM), 2015 IEEE International Conference on …, 2015
7*2015
LinkedPipes DCAT-AP Viewer: A Native DCAT-AP Data Catalog.
J Klímek, P Skoda
ISWC (P&D/Industry/BlueSky), 2018
62018
Reusable transformations of Data Cube Vocabulary datasets from the fiscal domain
J Mynarz, J Klímek, M Dudáš, P Škoda, C Engels, FA Musyaffa, V Svátek
Proceedings of the 4th International Workshop on Semantic Statistics co …, 2016
62016
Improving quality of ligand-binding site prediction with Bayesian optimization
R Krivák, D Hoksza, P Škoda
2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2017
42017
Speeding up publication of Linked Data using data chunking in LinkedPipes ETL
J Klímek, P Škoda
OTM Confederated International Conferences" On the Move to Meaningful …, 2017
32017
Using Bayesian modeling on molecular fragments features for virtual screening
D Hoksza, P Škoda
2016 IEEE Conference on Computational Intelligence in Bioinformatics and …, 2016
32016
2d pharmacophore query generation
D Hoksza, P Škoda
International Symposium on Bioinformatics Research and Applications, 289-300, 2014
32014
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Articles 1–20