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Benjamin B. Chu
Benjamin B. Chu
Verified email at stanford.edu - Homepage
Title
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Cited by
Year
OpenMendel: a cooperative programming project for statistical genetics
H Zhou, JS Sinsheimer, DM Bates, BB Chu, CA German, SS Ji, KL Keys, ...
Human genetics 139, 61-71, 2020
422020
Iterative hard thresholding in genome-wide association studies: Generalized linear models, prior weights, and double sparsity
BB Chu, KL Keys, CA German, H Zhou, JJ Zhou, EM Sobel, ...
GigaScience 9 (6), giaa044, 2020
172020
An efficient protocol for computing the p K a of Zn-bound water
C Grauffel, B Chu, C Lim
Physical Chemistry Chemical Physics 20 (47), 29637-29647, 2018
92018
Optimized Replacement T4 and T4+ T3 Dosing in Male and Female Hypothyroid Patients With Different BMIs Using a Personalized Mechanistic Model of Thyroid Hormone Regulation Dynamics
M Cruz-Loya*, BB Chu*, J Jonklaas, DF Schneider, J DiStefano III
Frontiers in Endocrinology 13, 2022
82022
A fast data-driven method for genotype imputation, phasing and local ancestry inference: MendelImpute. jl
BB Chu, EM Sobel, R Wasiolek, S Ko, JS Sinsheimer, H Zhou, K Lange
Bioinformatics 37 (24), 4756-4763, 2021
62021
Second-order group knockoffs with applications to GWAS
BB Chu, J Gu, Z Chen, T Morrison, E Candes, Z He, C Sabatti
arXiv preprint arXiv:2310.15069, 2023
32023
Unsupervised discovery of ancestry-informative markers and genetic admixture proportions in biobank-scale datasets
S Ko, BB Chu, D Peterson, C Okenwa, JC Papp, DH Alexander, EM Sobel, ...
The American Journal of Human Genetics 110 (2), 314-325, 2023
32023
Beyond guilty by association at scale: searching for causal variants on the basis of genome-wide summary statistics
Z He*, B Chu*, J Yang*, J Gu*, Z Chen, L Liu, T Morrison, ME Belloy, X Qi, ...
bioRxiv, 2024
22024
Controlled Variable Selection from Summary Statistics Only? A Solution via GhostKnockoffs and Penalized Regression
Z Chen, Z He, BB Chu, J Gu, T Morrison, C Sabatti, E Candès
ArXiv, 2024
12024
Multivariate genome-wide association analysis by iterative hard thresholding
BB Chu, S Ko, JJ Zhou, A Jensen, H Zhou, JS Sinsheimer, K Lange
Bioinformatics 39 (4), btad193, 2023
1*2023
Root cause discovery via permutations and Cholesky decomposition
J Li, BB Chu, IF Scheller, J Gagneur, MH Maathuis
arXiv preprint arXiv:2410.12151, 2024
2024
Second-order group knockoffs with applications to genome-wide association studies
BB Chu, J Gu, Z Chen, T Morrison, E Candès, Z He, C Sabatti
Bioinformatics 40 (10), btae580, 2024
2024
A blended genome and exome sequencing method captures genetic variation in an unbiased, high-quality, and cost-effective manner
TA Boltz*, BB Chu*, C Liao*, JM Sealock*, R Ye, L Majara, JM Fu, L Zhan, ...
bioRxiv, 2024
2024
A Flexible Quasi-Copula Distribution for Statistical Modeling
SS Ji, BB Chu, JS Sinsheimer, H Zhou, K Lange
arXiv preprint arXiv:2205.03505, 2022
2022
Scalable Algorithms for Genetic Association Studies, Genotype Imputation, and Ancestry Inference
BB Chu
University of California, Los Angeles, 2021
2021
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Articles 1–15