Cheong Xin Chan
Cheong Xin Chan
Australian Centre for Ecogenomics, Sch. Chemistry & Molecular Biosciences, University of
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Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants
DC Price, CX Chan, HS Yoon, EC Yang, H Qiu, APM Weber, R Schwacke, ...
Science 335 (6070), 843-847, 2012
Genome of the red alga Porphyridium purpureum
D Bhattacharya, DC Price, CX Chan, H Qiu, N Rose, S Ball, APM Weber, ...
Nature Communications 4, 1941, 2013
Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)
SH Brawley, NA Blouin, E Ficko-Blean, GL Wheeler, M Lohr, HV Goodson, ...
Proceedings of the National Academy of Sciences 114 (31), E6361-E6370, 2017
Next-generation phylogenomics
CX Chan, MA Ragan
Biology Direct 8, 3, 2013
Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis
H Liu, TG Stephens, RA González-Pech, VH Beltran, B Lapeyre, ...
Communications Biology 1, 95, 2018
Benchmarking of alignment-free sequence comparison methods
A Zielezinski, HZ Girgis, G Bernard, CA Leimeister, K Tang, T Dencker, ...
Genome Biology 20, 144, 2019
A genomic view of the reef-building coral Porites lutea and its microbial symbionts
SJ Robbins, CM Singleton, CX Chan, LF Messer, AU Geers, H Ying, ...
Nature Microbiology 4, 2090-2100, 2019
Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes
CX Chan, EC Yang, T Banerjee, HS Yoon, PT Martone, JM Estevez, ...
Current Biology 21 (4), 328-333, 2011
Trends in seaweed research
CX Chan, CL Ho, SM Phang
Trends in Plant Science 11 (4), 165-166, 2006
The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome
AR Mohamed, V Cumbo, S Harii, C Shinzato, CX Chan, MA Ragan, ...
Molecular Ecology 25 (13), 3127–3141, 2016
A new species of Burkholderia isolated from sugarcane roots promotes plant growth
C Paungfoo‐Lonhienne, TGA Lonhienne, YK Yeoh, RI Webb, ...
Microbial Biotechnology 7 (2), 142-154, 2014
The algal revolution
J Brodie, CX Chan, O De Clerck, JM Cock, SM Coelho, C Gachon, ...
Trends in Plant Science 22 (8), 726-738, 2017
Optimisation of RNA extraction from Gracilaria changii (Gracilariales, Rhodophyta)
CX Chan, SS Teo, CL Ho, RY Othman, SM Phang
Journal of Applied Phycology 16 (4), 297-301, 2004
The ReFuGe 2020 Consortium—using “omics” approaches to explore the adaptability and resilience of coral holobionts to environmental change
CR Voolstra, DJ Miller, MA Ragan, A Hoffmann, O Hoegh-Guldberg, ...
Frontiers in Marine Science, 68, 2015
Inferring phylogenies of evolving sequences without multiple sequence alignment
CX Chan, G Bernard, O Poirion, JM Hogan, MA Ragan
Scientific Reports 4, 6504, 2014
Lateral transfer of genes and gene fragments in Staphylococcus extends beyond mobile elements
CX Chan, RG Beiko, MA Ragan
Journal of Bacteriology 193 (15), 3964-3977, 2011
Are protein domains modules of lateral genetic transfer?
CX Chan, AE Darling, RG Beiko, MA Ragan
PLoS One 4 (2), e4524, 2009
Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism
CX Chan, NA Blouin, Y Zhuang, S Zäuner, SE Prochnik, E Lindquist, S Lin, ...
Journal of Phycology 48 (6), 1328-1342, 2012
Lateral transfer of genes and gene fragments in prokaryotes
CX Chan, RG Beiko, AE Darling, MA Ragan
Genome Biology and Evolution 1, 429-438, 2009
Alignment-free inference of hierarchical and reticulate phylogenomic relationships
G Bernard, CX Chan, Y Chan, XY Chua, Y Cong, JM Hogan, ...
Briefings in Bioinformatics 20 (2), 426-435, 2019
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