|Early transmission dynamics in Wuhan, China, of novel coronavirus–infected pneumonia|
Q Li, X Guan, P Wu, X Wang, L Zhou, Y Tong, R Ren, KSM Leung, ...
New England journal of medicine, 2020
|ggtree: an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data|
G Yu, DK Smith, H Zhu, Y Guan, TTY Lam
Methods in Ecology and Evolution 8 (1), 28-36, 2017
|Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins|
TTY Lam, N Jia, YW Zhang, MHH Shum, JF Jiang, HC Zhu, YG Tong, ...
Nature 583 (7815), 282-285, 2020
|Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)|
A Rambaut, TT Lam, L Max Carvalho, OG Pybus
Virus evolution 2 (1), vew007, 2016
|The sequence and de novo assembly of the giant panda genome|
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
|Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic|
MF Boni, P Lemey, X Jiang, TTY Lam, BW Perry, TA Castoe, A Rambaut, ...
Nature microbiology 5 (11), 1408-1417, 2020
|Early transmissibility assessment of the N501Y mutant strains of SARS-CoV-2 in the United Kingdom, October to November 2020|
K Leung, MHH Shum, GM Leung, TTY Lam, JT Wu
Eurosurveillance 26 (1), 2002106, 2021
|The genesis and source of the H7N9 influenza viruses causing human infections in China|
TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ...
Nature 502 (7470), 241-244, 2013
|Co-circulation of three camel coronavirus species and recombination of MERS-CoVs in Saudi Arabia|
JSM Sabir, TTY Lam, MMM Ahmed, L Li, Y Shen, S EM Abo-Aba, ...
Science 351 (6268), 81-84, 2016
|Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree|
G Yu, TTY Lam, H Zhu, Y Guan
Molecular biology and evolution 35 (12), 3041-3043, 2018
|Molecular epidemiology of PRRSV: a phylogenetic perspective|
M Shi, TTY Lam, CC Hon, RKH Hui, KS Faaberg, T Wennblom, ...
Virus research 154 (1-2), 7-17, 2010
|Phylogeny-based evolutionary, demographical, and geographical dissection of North American type 2 porcine reproductive and respiratory syndrome viruses|
M Shi, TTY Lam, CC Hon, MP Murtaugh, PR Davies, RKH Hui, J Li, ...
Journal of virology 84 (17), 8700-8711, 2010
|The ever-expanding diversity of porcine reproductive and respiratory syndrome virus|
MP Murtaugh, T Stadejek, JE Abrahante, TTY Lam, FCC Leung
Virus research 154 (1-2), 18-30, 2010
|Molecular characterization of the fecal microbiota in patients with nonalcoholic steatohepatitis–a longitudinal study|
VWS Wong, CH Tse, TTY Lam, GLH Wong, AML Chim, WCW Chu, ...
PloS one 8 (4), e62885, 2013
|Evolutionary genetics of human enterovirus 71: origin, population dynamics, natural selection, and seasonal periodicity of the VP1 gene|
KK Tee, TTY Lam, YF Chan, JM Bible, A Kamarulzaman, CYW Tong, ...
Journal of virology 84 (7), 3339-3350, 2010
|Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data|
LG Wang, TTY Lam, S Xu, Z Dai, L Zhou, T Feng, P Guo, CW Dunn, ...
Molecular biology and evolution 37 (2), 599-603, 2020
|Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus|
CC Hon, TY Lam, ZL Shi, AJ Drummond, CW Yip, F Zeng, PY Lam, ...
Journal of virology 82 (4), 1819-1826, 2008
|Dissemination, divergence and establishment of H7N9 influenza viruses in China|
TTY Lam, B Zhou, J Wang, Y Chai, Y Shen, X Chen, C Ma, W Hong, ...
Nature 522 (7554), 102-105, 2015
|The rapidly expanding CRF01_AE epidemic in China is driven by multiple lineages of HIV-1 viruses introduced in the 1990s|
Y Feng, X He, JH Hsi, F Li, X Li, Q Wang, Y Ruan, H Xing, TTY Lam, ...
AIDS (London, England) 27 (11), 1793, 2013
|Full-genome deep sequencing and phylogenetic analysis of novel human betacoronavirus|
M Cotten, TT Lam, SJ Watson, AL Palser, V Petrova, P Grant, OG Pybus, ...
Emerging infectious diseases 19 (5), 736, 2013