| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 2552* | 2020 |
| The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020 | 1025 | 2020 |
| Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... Cell 184 (8), 2239-2254. e39, 2021 | 390 | 2021 |
| Identification and determination of the number of immature green citrus fruit in a canopy under different ambient light conditions S Sengupta, WS Lee Biosystems Engineering 117, 51-61, 2014 | 240 | 2014 |
| Allele-specific open chromatin in human iPSC neurons elucidates functional disease variants S Zhang, H Zhang, Y Zhou, M Qiao, S Zhao, A Kozlova, J Shi, AR Sanders, ... Science 369 (6503), 561-565, 2020 | 102 | 2020 |
| Imaging-genomic study of head and neck squamous cell carcinoma: associations between radiomic phenotypes and genomic mechanisms via integration of the cancer genome atlas and … Y Zhu, ASR Mohamed, SY Lai, S Yang, A Kanwar, L Wei, M Kamal, ... JCO clinical cancer informatics 3, 1-9, 2019 | 57 | 2019 |
| Bayclone: Bayesian nonparametric inference of tumor subclones using NGS data S Sengupta, J Wang, J Lee, P Müller, K Gulukota, A Banerjee, Y Ji Pacific symposium on biocomputing co-chairs, 467-478, 2014 | 46 | 2014 |
| Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples MH Bailey, WU Meyerson, LJ Dursi, LB Wang, G Dong, WW Liang, ... Nature communications 11 (1), 4748, 2020 | 45 | 2020 |
| Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... BioRxiv, 312041, 2018 | 43 | 2018 |
| Bayesian feature allocation models for tumor heterogeneity J Lee, P Müller, S Sengupta, K Gulukota, Y Ji Statistical Analysis for High-Dimensional Data: The Abel Symposium 2014, 211-232, 2016 | 42 | 2016 |
| Zodiac: a comprehensive depiction of genetic interactions in cancer by integrating TCGA data Y Zhu, Y Xu, DL Helseth Jr, K Gulukota, S Yang, LL Pesce, R Mitra, ... Journal of the National Cancer Institute 107 (8), djv129, 2015 | 39 | 2015 |
| Bayesian inference for intratumour heterogeneity in mutations and copy number variation J Lee, P Müller, S Sengupta, K Gulukota, Y Ji Journal of the Royal Statistical Society Series C: Applied Statistics 65 (4 …, 2016 | 31 | 2016 |
| PCAWG Evolution and Heterogeneity Working Group and the PCAWG Consortium. Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... Cell 184 (8), 2239-2254, 2021 | 30 | 2021 |
| Modelling supply chain network: a quality‐oriented approach K Das, S Sengupta International Journal of Quality & Reliability Management 27 (5), 506-526, 2010 | 29 | 2010 |
| Phased genotyping-by-sequencing enhances analysis of genetic diversity and reveals divergent copy number variants in maize H Manching, S Sengupta, KR Hopper, SW Polson, Y Ji, RJ Wisser G3: Genes, Genomes, Genetics 7 (7), 2161-2170, 2017 | 28 | 2017 |
| A Bayesian semiparametric model for bivariate sparse longitudinal data K Das, R Li, S Sengupta, R Wu Statistics in medicine 32 (22), 3899-3910, 2013 | 23 | 2013 |
| Ultra-fast local-haplotype variant calling using paired-end DNA-sequencing data reveals somatic mosaicism in tumor and normal blood samples S Sengupta, K Gulukota, Y Zhu, C Ober, K Naughton, ... Nucleic acids research 44 (3), e25-e25, 2016 | 22 | 2016 |
| Conjugate priors and posterior inference for the matrix Langevin distribution on the Stiefel manifold S Pal, S Sengupta, R Mitra, A Banerjee | 12 | 2020 |
| PairClone: a Bayesian subclone caller based on mutation pairs T Zhou, P Müller, S Sengupta, Y Ji Journal of the Royal Statistical Society Series C: Applied Statistics 68 (3 …, 2019 | 12 | 2019 |
| Two models involving Bayesian nonparametric techniques S Sengupta University of Florida, 2013 | 11 | 2013 |
Yuan Ji, PhDThe University of ChicagoVerified email at uchicago.edu
