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Devin P Sullivan
Devin P Sullivan
Encodia Inc.
E-mailová adresa ověřena na: encodia.com - Domovská stránka
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Citace
Citace
Rok
A subcellular map of the human proteome
PJ Thul, L Åkesson, M Wiking, D Mahdessian, A Geladaki, H Ait Blal, ...
Science 356 (6340), eaal3321, 2017
26392017
The human secretome
M Uhlén, MJ Karlsson, A Hober, AS Svensson, J Scheffel, D Kotol, ...
Science signaling 12 (609), eaaz0274, 2019
3332019
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
2152020
Deep learning is combined with massive-scale citizen science to improve large-scale image classification
DP Sullivan, CF Winsnes, L Åkesson, M Hjelmare, M Wiking, R Schutten, ...
Nature biotechnology 36 (9), 820-828, 2018
2072018
Spatiotemporal dissection of the cell cycle with single-cell proteogenomics
D Mahdessian, AJ Cesnik, C Gnann, F Danielsson, L Stenström, M Arif, ...
Nature 590 (7847), 649-654, 2021
1342021
Analysis of the human protein atlas image classification competition
W Ouyang, CF Winsnes, M Hjelmare, AJ Cesnik, L Åkesson, H Xu, ...
Nature methods 16 (12), 1254-1261, 2019
1172019
A subcellular map of the human proteome. Science 356: eaal3321
PJ Thul, L Åkesson, M Wiking, D Mahdessian, A Geladaki, H Ait Blal, ...
742017
Active machine learning-driven experimentation to determine compound effects on protein patterns
AW Naik, JD Kangas, DP Sullivan, RF Murphy
Elife 5, e10047, 2016
562016
Unbiased rare event sampling in spatial stochastic systems biology models using a weighted ensemble of trajectories
RM Donovan, JJ Tapia, DP Sullivan, JR Faeder, RF Murphy, M Dittrich, ...
PLoS computational biology 12 (2), e1004611, 2016
442016
Joint modeling of cell and nuclear shape variation
GR Johnson, TE Buck, DP Sullivan, GK Rohde, RF Murphy
Molecular Biology of the Cell 26 (22), 4046-4056, 2015
372015
Vitamin D-deficient mice have more invasive urinary tract infection
O Hertting, P Lüthje, D Sullivan, P Aspenström, A Brauner
PLoS One 12 (7), e0180810, 2017
312017
Seeing more: A future of augmented microscopy
DP Sullivan, E Lundberg
Cell 173 (3), 546-548, 2018
212018
Spatial characterization of the human centrosome proteome opens up new horizons for a small but versatile organelle
F Danielsson, D Mahdessian, U Axelsson, D Sullivan, M Uhlén, ...
Proteomics 20 (23), 1900361, 2020
72020
SBML level 3 package: spatial processes, version 1, release 1
JC Schaff, A Lakshminarayana, RF Murphy, FT Bergmann, A Funahashi, ...
Journal of Integrative Bioinformatics 20 (1), 20220054, 2023
62023
Design automation for biological models: a pipeline that incorporates spatial and molecular complexity
DP Sullivan, R Arepally, RF Murphy, JJ Tapia, JR Faeder, M Dittrich, ...
Proceedings of the 25th edition on Great Lakes Symposium on VLSI, 321-323, 2015
62015
Multi-label prediction of subcellular localization in confocal images using deep neural networks
CF Winsnes, DP Sullivan, K Smith, E Lundberg
Molecular Biology of the Cell 27 (25), 2016
52016
Spatiotemporal dissection of the cell cycle regulated human proteome
D Mahdessian, DP Sullivan, F Danielsson, M Arif, C Zhang, L Åkesson, ...
22019
Transcriptome profiling of the interconnection of pathways involved in malignant transformation and response to hypoxia
F Danielsson, E Fasterius, D Sullivan, L Hases, K Sanli, C Zhang, ...
Oncotarget 9 (28), 19730, 2018
22018
Image-derived generative modeling of complex cellular organization in both space and time
DP Sullivan, JR Faeder, GK Rhode, I Sbalzarini
PhD thesis CMU-CB-15-102, Carnegie Mellon University, Pittsburgh, PA, 2015
22015
Author Correction: Spatiotemporal dissection of the cell cycle with single-cell proteogenomics
D Mahdessian, AJ Cesnik, C Gnann, F Danielsson, L Stenström, M Arif, ...
Nature 608 (7924), E32, 2022
12022
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Články 1–20