CASTp 3.0: computed atlas of surface topography of proteins W Tian, C Chen, X Lei, J Zhao, J Liang Nucleic acids research 46 (W1), W363-W367, 2018 | 1637 | 2018 |
Mitochondria-to-nucleus retrograde signaling drives formation of cytoplasmic chromatin and inflammation in senescence MG Vizioli, T Liu, KN Miller, NA Robertson, K Gilroy, AB Lagnado, ... Genes & development 34 (5-6), 428-445, 2020 | 232 | 2020 |
Apoptotic stress causes mtDNA release during senescence and drives the SASP S Victorelli, H Salmonowicz, J Chapman, H Martini, MG Vizioli, JS Riley, ... Nature 622 (7983), 627-636, 2023 | 67 | 2023 |
BRD4-mediated repression of p53 is a target for combination therapy in AML AL Latif, A Newcombe, S Li, K Gilroy, NA Robertson, X Lei, HJS Stewart, ... Nature communications 12 (1), 241, 2021 | 47 | 2021 |
Biological Sources of Intrinsic and Extrinsic Noise in cI Expression of Lysogenic Phage Lambda X Lei, W Tian, H Zhu, T Chen, P Ao Scientific reports 5 (1), 13597, 2015 | 34 | 2015 |
Probabilistic control of HIV latency and transactivation by the Tat gene circuit Y Cao, X Lei, RM Ribeiro, AS Perelson, J Liang Proceedings of the National Academy of Sciences 115 (49), 12453-12458, 2018 | 24 | 2018 |
A JAK/STAT-mediated inflammatory signaling cascade drives oncogenesis in AF10-rearranged AML BR Chen, A Deshpande, K Barbosa, M Kleppe, X Lei, N Yeddula, PS Vela, ... Blood, The Journal of the American Society of Hematology 137 (24), 3403-3415, 2021 | 16 | 2021 |
A knot polynomial invariant for analysis of topology of RNA stems and protein disulfide bonds W Tian, X Lei, LH Kauffman, J Liang Computational and Mathematical Biophysics 5 (1), 21-30, 2017 | 14 | 2017 |
Loop extrusion promotes an alternate pathway for isotype switching HM Shen, R Wuerffel, JF Cantillo, S Priyadarshi, X Lei, J Liang, YL Wu, ... Cell reports 37 (8), 2021 | 9 | 2021 |
An Igh distal enhancer modulates antigen receptor diversity by determining locus conformation KH Bhat, S Priyadarshi, S Naiyer, X Qu, H Farooq, E Kleiman, J Xu, X Lei, ... Nature communications 14 (1), 1225, 2023 | 8 | 2023 |
Structure-based pathogenicity relationship identifier for predicting effects of single missense variants and discovery of higher-order cancer susceptibility clusters of mutations B Wang, X Lei, W Tian, A Perez-Rathke, YY Tseng, J Liang Briefings in Bioinformatics 24 (4), bbad206, 2023 | 3 | 2023 |
An Igh novel enhancer modulates antigen receptor diversity by determining locus conformation KH Bhat, S Priyardarshi, S Naiyer, X Qu, H Farooq, E Kleiman, J Xu, X Lei, ... bioRxiv, 2022.05. 23.492988, 2022 | 3 | 2022 |
Structure-based method for predicting deleterious missense snps B Wang, X Lei, W Tian, A Perez-Rathke, Y Tseng, J Liang Biophysical Journal 116 (3), 423a-424a, 2019 | 3 | 2019 |
Understand the noise of CI expression in phage λ lysogen H Zhu, T Chen, X Lei, W Tian, Y Cao, P Ao Proceedings of the 31st Chinese Control Conference, 7432-7436, 2012 | 3 | 2012 |
Extrinsic vs. intrinsic noises in Phage lambda genetic switch W Tian, H Zhu, X Lei, P Ao 2011 IEEE International Conference on Systems Biology (ISB), 67-71, 2011 | 3 | 2011 |
Transcriptional control of leukemogenesis by the chromatin reader SGF29 K Barbosa, A Deshpande, M Perales, P Xiang, R Murad, AB Pramod, ... Blood 143 (8), 697-712, 2024 | 2 | 2024 |
SeqMapPDB: A Standalone Pipeline to Identify Representative Structures of Protein Sequences and Mapping Residue Indices in Real-Time at Proteome Scale B Wang, X Lei, W Tian, A Perez-Rathke, YY Tseng, J Liang arXiv preprint arXiv:2202.11551, 2022 | 2 | 2022 |
Apoptotic stress causes mtDNA release during senescence and drives the SASP (vol 622, pg 627, 2023) S Victorelli, H Salmonowicz, J Chapman, H Martini, MG Vizioli, JS Riley, ... Nature 625 (7995), E15-E15, 2024 | 1 | 2024 |
Histone chaperone HIRA, Promyelocytic Leukemia (PML) protein and p62/SQSTM1 coordinate to regulate inflammation during cell senescence and aging. N Dasgupta, X Lei, R Arnold, MG Teneche, KN Miller, A Rajesh, A Davis, ... bioRxiv, 2023.06. 24.546372, 2023 | 1 | 2023 |
Structure-Based Pathogenicity Relationship Identifier (SPRI): A Novel Structure-Guided Method to Evaluate Pathological Effect of Missense Mutations B Wang, X Lei, W Tian, A Perez-Rathke, YY Tseng, J Liang bioRxiv, 2022.09. 27.508720, 2022 | 1 | 2022 |