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Lavanya Kannan
Lavanya Kannan
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A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches
DM Kristensen, L Kannan, MK Coleman, YI Wolf, A Sorokin, EV Koonin, ...
Bioinformatics 26 (12), 1481-1487, 2010
2282010
Consensus on molecular subtypes of high-grade serous ovarian carcinoma
GM Chen, L Kannan, L Geistlinger, V Kofia, Z Safikhani, DMA Gendoo, ...
Clinical Cancer Research 24 (20), 5037-5047, 2018
1072018
Maximum parsimony on phylogenetic networks
L Kannan, WC Wheeler
Algorithms for molecular biology 7, 1-10, 2012
852012
Public data and open source tools for multi-assay genomic investigation of disease
L Kannan, M Ramos, A Re, N El-Hachem, Z Safikhani, DMA Gendoo, ...
Briefings in bioinformatics 17 (4), 603-615, 2016
612016
Models of gene gain and gene loss for probabilistic reconstruction of gene content in the last universal common ancestor of life
L Kannan, H Li, B Rubinstein, A Mushegian
Biology Direct 8, 1-12, 2013
222013
Consensus on molecular subtypes of ovarian cancer
GM Chen, L Kannan, L Geistlinger, V Kofia, Z Safikhani, DMA Gendoo, ...
bioRxiv, 162685, 2017
82017
Exactly computing the parsimony scores on phylogenetic networks using dynamic programming
L Kannan, WC Wheeler
Journal of Computational Biology 21 (4), 303-319, 2014
82014
Balanced and 1-balanced graph constructions
AM Hobbs, L Kannan, HJ Lai, H Lai, G Weng
Discrete applied mathematics 158 (14), 1511-1523, 2010
62010
Transforming a graph into a 1-balanced graph
L Kannan, A Hobbs, HJ Lai, H Lai
Discrete applied mathematics 157 (2), 300-308, 2009
62009
A polynomial-time algorithm computing lower and upper bounds of the rooted subtree prune and regraft distance
L Kannan, H Li, A Mushegian
Journal of Computational Biology 18 (5), 743-757, 2011
12011
Densities in graphs and matroids
L Kannan
Texas A&M University, 2007
12007
Exactly Computing the Parsimony Scores on Phylogenetic Networks Using Dynamic Programming (vol 21, pg 303, 2014)
L Kannan, WC Wheeler
JOURNAL OF COMPUTATIONAL BIOLOGY 21 (6), 476-476, 2014
2014
My Research
L Kannan
2006
OBTAINING UNIFORMLY DENSE GRAPHS
L KANNAN, HJ LAI, H LAI
2006
Constructing Graphs from sequences
L Kannan
2002
A lower bound heuristic for the subtree prune and regraft distance between rooted trees
L Kannan, H Li, A Mushegian
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Articles 1–16