Thomas Lingner
Thomas Lingner
Department of Bioinformatics, University of Goettingen
Verified email at
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BCI competition 2003-data set IIb: support vector machines for the P300 speller paradigm
M Kaper, P Meinicke, U Grossekathoefer, T Lingner, H Ritter
IEEE Transactions on biomedical Engineering 51 (6), 1073-1076, 2004
Critical assessment of metagenome interpretation—a benchmark of metagenomics software
A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ...
Nature methods 14 (11), 1063-1071, 2017
Peroxisomal lactate dehydrogenase is generated by translational readthrough in mammals
F Schueren, T Lingner, R George, J Hofhuis, C Dickel, J Gärtner, S Thoms
Elife 3, e03640, 2014
Orphelia: predicting genes in metagenomic sequencing reads
KJ Hoff, T Lingner, P Meinicke, M Tech
Nucleic acids research 37 (suppl_2), W101-W105, 2009
Gene prediction in metagenomic fragments: a large scale machine learning approach
KJ Hoff, M Tech, T Lingner, R Daniel, B Morgenstern, P Meinicke
BMC bioinformatics 9 (1), 1-14, 2008
Identification of novel plant peroxisomal targeting signals by a combination of machine learning methods and in vivo subcellular targeting analyses
T Lingner, AR Kataya, GE Antonicelli, A Benichou, K Nilssen, XY Chen, ...
The Plant Cell 23 (4), 1556-1572, 2011
MediGRID: Towards a user friendly secured grid infrastructure
D Krefting, J Bart, K Beronov, O Dzhimova, J Falkner, M Hartung, ...
Future Generation Computer Systems 25 (3), 326-336, 2009
Neurons under T cell attack coordinate phagocyte-mediated synaptic stripping
G Di Liberto, S Pantelyushin, M Kreutzfeldt, N Page, S Musardo, R Coras, ...
Cell 175 (2), 458-471. e19, 2018
The IL-1 pathway is hyperactive in hidradenitis suppurativa and contributes to skin infiltration and destruction
E Witte-Händel, K Wolk, A Tsaousi, ML Irmer, R Mößner, O Shomroni, ...
Journal of Investigative Dermatology 139 (6), 1294-1305, 2019
Mixture models for analysis of the taxonomic composition of metagenomes
P Meinicke, KP Aßhauer, T Lingner
Bioinformatics 27 (12), 1618-1624, 2011
Remote homology detection based on oligomer distances
T Lingner, P Meinicke
Bioinformatics 22 (18), 2224-2231, 2006
mRNA quality control is bypassed for immediate export of stress-responsive transcripts
G Zander, A Hackmann, L Bender, D Becker, T Lingner, G Salinas, ...
Nature 540 (7634), 593-596, 2016
PredPlantPTS1: A Web Server for the Prediction of Plant Peroxisomal Proteins
S Reumann, D Buchwald, T Lingner
Frontiers in plant science 3, 194, 2012
CoMet—a web server for comparative functional profiling of metagenomes
T Lingner, KP Aßhauer, F Schreiber, P Meinicke
Nucleic acids research 39 (suppl_2), W518-W523, 2011
Non-canonical peroxisome targeting signals: identification of novel PTS1 tripeptides and characterization of enhancer elements by computational permutation analysis
G Chowdhary, ARA Kataya, T Lingner, S Reumann
BMC plant biology 12 (1), 1-14, 2012
MarVis: a tool for clustering and visualization of metabolic biomarkers
A Kaever, T Lingner, K Feussner, C Göbel, I Feussner, P Meinicke
BMC bioinformatics 10 (1), 1-8, 2009
Expression of the DNA-binding factor TOX promotes the encephalitogenic potential of microbe-induced autoreactive CD8+ T cells
N Page, B Klimek, M De Roo, K Steinbach, H Soldati, S Lemeille, ...
Immunity 48 (5), 937-950. e8, 2018
Metabolite-based clustering and visualization of mass spectrometry data using one-dimensional self-organizing maps
P Meinicke, T Lingner, A Kaever, K Feussner, C Göbel, I Feussner, ...
Algorithms for Molecular Biology 3 (1), 1-18, 2008
Protein signature-based estimation of metagenomic abundances including all domains of life and viruses
H Klingenberg, KP Aßhauer, T Lingner, P Meinicke
Bioinformatics 29 (8), 973-980, 2013
Characterization, prediction and evolution of plant peroxisomal targeting signals type 1 (PTS1s)
S Reumann, G Chowdhary, T Lingner
Biochimica et Biophysica Acta (BBA)-Molecular Cell Research 1863 (5), 790-803, 2016
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