| MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis D Vallenet, A Calteau, M Dubois, P Amours, A Bazin, M Beuvin, L Burlot, ... Nucleic acids research 48 (D1), D579-D589, 2020 | 238 | 2020 |
| MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes D Vallenet, A Calteau, S Cruveiller, M Gachet, A Lajus, A Josso, J Mercier, ... Nucleic acids research 45 (D1), D517-D528, 2017 | 210 | 2017 |
| MicroScope—an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data C Médigue, A Calteau, S Cruveiller, M Gachet, G Gautreau, A Josso, ... Briefings in bioinformatics 20 (4), 1071-1084, 2019 | 61 | 2019 |
| A primer on the analysis of high-throughput sequencing data for detection of plant viruses D Kutnjak, L Tamisier, I Adams, N Boonham, T Candresse, M Chiumenti, ... Microorganisms 9 (4), 841, 2021 | 38 | 2021 |
| Facilitating the adoption of high‐throughput sequencing technologies as a plant pest diagnostic test in laboratories: A step‐by‐step description B Lebas, I Adams, M Al Rwahnih, S Baeyen, GJ Bilodeau, AG Blouin, ... EPPO Bulletin 52 (2), 394-418, 2022 | 25 | 2022 |
| Guidelines for the reliable use of high throughput sequencing technologies to detect plant pathogens and pests S Massart, I Adams, M Al Rwahnih, S Baeyen, GJ Bilodeau, AG Blouin, ... Peer Community Journal 2, 2022 | 23 | 2022 |
| Validation of High-Throughput Sequencing as Virus Indexing Test for Musa Germplasm: Performance Criteria Evaluation and Contamination Monitoring Using an … W Rong, J Rollin, M Hanafi, N Roux, S Massart PhytoFrontiers™ 3 (1), 91-102, 2023 | 11 | 2023 |
| A primer on the analysis of high-throughput sequencing data for detection of plant viruses. Microorganisms 9: 841 D Kutnjak, L Tamisier, I Adams, N Boonham, T Candresse, M Chiumenti, ... | 10 | 2021 |
| Managing the deluge of newly discovered plant viruses and viroids: an optimized scientific and regulatory framework for their characterization and risk analysis N Fontdevila Pareta, M Khalili, A Maachi, MPS Rivarez, J Rollin, ... Frontiers in Microbiology 14, 1181562, 2023 | 5 | 2023 |
| Going beyond consensus genome sequences: An innovative SNP-based methodology reconstructs different Ugandan cassava brown streak virus haplotypes at a nationwide scale in Rwanda C Nyirakanani, L Tamisier, JP Bizimana, J Rollin, A Nduwumuremyi, ... Virus Evolution 9 (2), vead053, 2023 | 2 | 2023 |
| MICROSCOPE: an integrated platform for the Exploration and Curation of Microbrial Genomes D Vallenet, A Calteau, S Cruveiller, M Gachet, G Gautreau, A Josso, ... Biologie, Informatiqueet Mathématiques, 119, 2017 | 1 | 2017 |
| First viruses infecting cockspur coral tree (Erythrina crista-galli L.): discovery of a putative novel capillovirus and a new host for the prune dwarf virus D Škorić, D Grbin, MŠ Musić, J Rollin, S Massart Journal of plant pathology 106 (1), 107-116, 2024 | | 2024 |
| Cont-ID: detection of sample cross-contamination in viral metagenomic data J Rollin, W Rong, S Massart BMC biology 21 (1), 217, 2023 | | 2023 |
| Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies J Rollin, R Bester, Y Brostaux, K Caglayan, K De Jonghe, A Eichmeier, ... PeerJ 11, e15816, 2023 | | 2023 |
| Development and validation of innovative sequencing tools for the fast and efficient detection of plant virus J Rollin ULiège. GxABT-Liège Université. Gembloux Agro-Bio Tech [liege], Gembloux …, 2023 | | 2023 |
| Monitoring cross-contamination in viral metagenomic data using an alien-control J Rollin, W Rong, S Massart 19 eme Rencontres de Virologie Végétale, 2023 | | 2023 |
| Managing the deluge of newly discovered plant viruses and viroids N Fontdevila Pareta, M Khalili, A Maachi, MPS Rivarez, J Rollin, ... International Advances in Plant Virology (IAPV22), 2022 | | 2022 |
| Cont-ID: detection of cross-contamination in metagenomic data J Rollin, W Rong, S Massart 18 eme Rencontres de Virologie Végétale, 2021 | | 2021 |
| Virome characterization of pome fruit European genetic resources for future breeding and risk analysis N Fontdevila Pareta, M Lateur, S Steyer, A Blouin, J Rollin, S Massart 18 eme Rencontres de Virologie Végétale, 2021 | | 2021 |
| INEXTVIR: High throughput sequencing of the virome of agricultural crops and ecosystems across Europe KD Hiri, J Rollin, S Grigorii, M Nikolski, S Massart, T Curk, M Hren ESCS-ECCB 2020, 2020 | | 2020 |
