Janusz Bujnicki

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Stanislaw Dunin-HorkawiczUniversity of Warsaw, Institute of Evolutionary BiologyVerified email at uw.edu.pl
Katarzyna H. KaminskaWarsaw University of TechnologyVerified email at tele.pw.edu.pl
Jan KosinskiEMBL HamburgVerified email at embl.de
Michał BonieckiInternational Institute of Molecular and Cell Biology in WarsawVerified email at genesilico.pl
Krzysztof SkowronekInternational Institute of Molecular and Cell BiologyVerified email at iimcb.gov.pl
Marcin PawlowskiRowAnalyticsVerified email at nationwidechildrens.org
Magdalena MachnickaInstitute of Informatics, University of WarsawVerified email at mimuw.edu.pl
ANNA CZERWONIECBioinformatics Laboratory, IMBB, Adam Mickiewicz University; VitaInSilica Sp. z o.o.Verified email at amu.edu.pl
Lukasz P. KozlowskiUniversity of Warsaw, Solid Scientometrics Sp z o.o.Verified email at mimuw.edu.pl
Irina TuszynskaUniwersytet WarszawskiVerified email at mimuw.edu.pl
Tomasz Krzysztof WireckiPostdoctoral Researcher, Institute of Molecular and Cell Biology in WarsawVerified email at iimcb.gov.pl
Kaja Milanowska-ZabelArdigenVerified email at ardigen.com
Karolina L. TkaczukSano Center for Computational MedicineVerified email at sanoscience.org
Grzegorz ChojnowskiEMBL HamburgVerified email at embl-hamburg.de
Pietro BoccalettoIIMCB, Warsaw - Laboratory of Bioinformatics and Protein EngineeringVerified email at genesilico.pl
Marcin MagnusInternational Institute of Molecular Mechanisms and Machines (IMol), PolandVerified email at imol.institute
Paweł PiątkowskiF. Hoffmann-La RocheVerified email at genesilico.pl
Nithin CAssistant Professor (adiunkt), Biological and Chemical Research Centre, Department of ChemistryVerified email at chem.uw.edu.pl
Michał J GajdaMigamake Pte LtdVerified email at mimuw.edu.pl
daniel fischerVerified email at buffalo.edu

Janusz Bujnicki

Professor of Biology, International Institute of Molecular and Cell Biology in Warsaw

Verified email at genesilico.pl - Homepage

Bioinformatics Biochemistry Molecular Modeling Synthetic Biology Structural Biology


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MODOMICS: a database of RNA modification pathways. 2017 update P Boccaletto, MA Machnicka, E Purta, P Piątkowski, B Bagiński, ... Nucleic acids research 46 (D1), D303-D307, 2018	1214	2018
MODOMICS: a database of RNA modification pathways—2013 update MA Machnicka, K Milanowska, O Osman Oglou, E Purta, M Kurkowska, ... Nucleic acids research 41 (D1), D262-D267, 2012	984	2012
Transcriptome profile of human colorectal adenomas J Sabates-Bellver, LG Van der Flier, M de Palo, E Cattaneo, C Maake, ... Molecular cancer research 5 (12), 1263-1275, 2007	537	2007
GeneSilico protein structure prediction meta-server MA Kurowski, JM Bujnicki Nucleic Acids Research 31 (13), 3305-3307, 2003	498	2003
Pcons: A neural‐network–based consensus predictor that improves fold recognition J Lundström, L Rychlewski, J Bujnicki, A Elofsson Protein science 10 (11), 2354-2362, 2001	367	2001
MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins LP Kozlowski, JM Bujnicki BMC bioinformatics 13 (1), 1-11, 2012	338	2012
IAPs contain an evolutionarily conserved ubiquitin-binding domain that regulates NF-κB as well as cell survival and oncogenesis M Gyrd-Hansen, M Darding, M Miasari, MM Santoro, L Zender, W Xue, ... Nature cell biology 10 (11), 1309-1317, 2008	296	2008
Structure prediction meta server JM Bujnicki, A Elofsson, D Fischer, L Rychlewski Bioinformatics 17 (8), 750-751, 2001	263	2001
MODOMICS: a database of RNA modification pathways S Dunin-Horkawicz, A Czerwoniec, MJ Gajda, M Feder, H Grosjean, ... Nucleic acids research 34 (suppl_1), D145-D149, 2006	252	2006
SimRNA: a coarse-grained method for RNA folding simulations and 3D structure prediction MJ Boniecki, G Lach, WK Dawson, K Tomala, P Lukasz, T Soltysinski, ... Nucleic acids research 44 (7), e63-e63, 2016	251	2016
RNA-Puzzles: a CASP-like evaluation of RNA three-dimensional structure prediction JA Cruz, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, S Cao, R Das, ... Rna 18 (4), 610-625, 2012	243	2012
MODOMICS: a database of RNA modification pathways. 2008 update A Czerwoniec, S Dunin-Horkawicz, E Purta, KH Kaminska, JM Kasprzak, ... Nucleic acids research 37 (suppl_1), D118-D121, 2009	242	2009
ModeRNA: a tool for comparative modeling of RNA 3D structure M Rother, K Rother, T Puton, JM Bujnicki Nucleic acids research 39 (10), 4007-4022, 2011	221	2011
MetaMQAP: a meta-server for the quality assessment of protein models M Pawlowski, MJ Gajda, R Matlak, JM Bujnicki BMC bioinformatics 9 (1), 1-20, 2008	212	2008
Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB MA Kurowski, AS Bhagwat, G Papaj, JM Bujnicki BMC genomics 4 (1), 1-6, 2003	207	2003
The YTH domain is a novel RNA binding domain Z Zhang, D Theler, KH Kaminska, M Hiller, P de la Grange, R Pudimat, ... Journal of Biological Chemistry 285 (19), 14701-14710, 2010	202	2010
Streptococcal Scl1 and Scl2 proteins form collagen-like triple helices Y Xu, DR Keene, JM Bujnicki, M Höök, S Lukomski Journal of Biological Chemistry 277 (30), 27312-27318, 2002	201	2002
Trm7p catalyses the formation of two 2′-O-methylriboses in yeast tRNA anticodon loop L Pintard, F Lecointe, JM Bujnicki, C Bonnerot, H Grosjean, B Lapeyre The EMBO journal 21 (7), 1811-1820, 2002	189	2002
A “FRankenstein's monster” approach to comparative modeling: Merging the finest fragments of Fold‐Recognition models and iterative model refinement aided by 3D structure evaluation J Kosinski, IA Cymerman, M Feder, MA Kurowski, JM Sasin, JM Bujnicki Proteins: Structure, Function, and Bioinformatics 53 (S6), 369-379, 2003	187	2003
Structure prediction and phylogenetic analysis of a functionally diverse family of proteins homologous to the MT-A70 subunit of the human mRNA: m6A methyltransferase JM Bujnicki, M Feder, M Radlinska, RM Blumenthal Journal of molecular evolution 55 (4), 431-444, 2002	183	2002

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