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Qiqing Tao
Qiqing Tao
Institute for Genomics and Evolutionary Medicine, Temple University
Verified email at temple.edu
Title
Cited by
Cited by
Year
Theoretical foundation of the RelTime method for estimating divergence times from variable evolutionary rates
K Tamura, Q Tao, S Kumar
Molecular biology and evolution 35 (7), 1770-1782, 2018
1662018
An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic
S Kumar, Q Tao, S Weaver, M Sanderford, MA Caraballo-Ortiz, S Sharma, ...
Molecular Biology and Evolution 38 (8), 3046-3059, 2021
732021
Fast and accurate estimates of divergence times from big data
B Mello, Q Tao, K Tamura, S Kumar
Molecular biology and evolution 34 (1), 45-50, 2017
532017
A Machine Learning Method for Detecting Autocorrelation of Evolutionary Rates in Large Phylogenies
Q Tao, K Tamura, F U. Battistuzzi, S Kumar
Molecular biology and evolution 36 (4), 811-824, 2019
482019
Reliable confidence intervals for RelTime estimates of evolutionary divergence times
Q Tao, K Tamura, S Kumar
Molecular Biology and Evolution 37 (1), 280-290, 2020
372020
Accurate timetrees require accurate calibrations
SB Hedges, Q Tao, M Walker, S Kumar
Proceedings of the National Academy of Sciences 115 (41), E9510-E9511, 2018
292018
RelTime relaxes the strict molecular clock throughout the phylogeny
FU Battistuzzi, Q Tao, L Jones, K Tamura, S Kumar
Genome Biology and Evolution 10 (6), 1631-1636, 2018
272018
Molecular dating for phylogenies containing a mix of populations and species by using Bayesian and RelTime approaches
B Mello, Q Tao, J Barba‐Montoya, S Kumar
Molecular ecology resources 21 (1), 122-136, 2021
222021
A new method for inferring timetrees from temporally sampled molecular sequences
S Miura, K Tamura, Q Tao, LA Huuki, SL Kosakovsky Pond, J Priest, ...
PLOS Computational Biology 16 (1), e1007046, 2020
222020
Efficient methods for dating evolutionary divergences
Q Tao, K Tamura, S Kumar
The Molecular Evolutionary Clock: Theory and Practice, 197-219, 2020
182020
Relative efficiencies of simple and complex substitution models in estimating divergence times in phylogenomics
Q Tao, J Barba-Montoya, LA Huuki, MK Durnan, S Kumar
Molecular Biology and Evolution 37 (6), 1819-1831, 2020
152020
Expressional Analysis of Immunoglobulin D in Cattle (Bos taurus), a Large Domesticated Ungulate
B Xu, J Wang, M Zhang, P Wang, Z Wei, Y Sun, Q Tao, L Ren, X Hu, ...
Public Library of Science 7 (9), e44719, 2012
142012
Data-driven speciation tree prior for better species divergence times in calibration-poor molecular phylogenies
Q Tao, J Barba-Montoya, S Kumar
Bioinformatics 37 (Supplement_1), i102-i110, 2021
92021
TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity
MA Caraballo-Ortiz, S Miura, M Sanderford, T Dolker, Q Tao, S Weaver, ...
Bioinformatics 38 (10), 2719-2726, 2022
82022
Molecular and morphological clocks for estimating evolutionary divergence times
J Barba-Montoya, Q Tao, S Kumar
BMC Ecology and Evolution 21 (1), 83, 2021
82021
Using a GTR+ Γ substitution model for dating sequence divergence when stationarity and time-reversibility assumptions are violated
J Barba-Montoya, Q Tao, S Kumar
Bioinformatics 36 (Supplement_2), i884-i894, 2020
82020
Assessing rapid relaxed-clock methods for phylogenomic dating
J Barba-Montoya, Q Tao, S Kumar
Genome Biology and Evolution 13 (11), evab251, 2021
72021
Kosakovsky Pond SL, Priest J., Deng J., Kumar S. 2020. A new method for inferring timetrees from temporally sampled molecular sequences
S Miura, K Tamura, Q Tao, LA Huuki
PLoS Comput. Biol 16, e1007046, 0
4
Computational reproducibility of molecular phylogenies
S Kumar, Q Tao, AP Lamarca, K Tamura
Molecular Biology and Evolution 40 (7), msad165, 2023
2023
Molecular Dating: Theoretical and Practical Investigations in Phylogenomics
Q Tao
Temple University, 2019
2019
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Articles 1–20