Assieh Saadatpour
Assieh Saadatpour
Associate Director, Johnson & Johnson
Verified email at
Cited by
Cited by
Mapping the mouse cell atlas by microwell-seq
X Han, R Wang, Y Zhou, L Fei, H Sun, S Lai, A Saadatpour, Z Zhou, ...
Cell 172 (5), 1091-1107. e17, 2018
High-fat diet enhances stemness and tumorigenicity of intestinal progenitors
S Beyaz, MD Mana, J Roper, D Kedrin, A Saadatpour, SJ Hong, ...
Nature 531, 2016
Boolean modeling in systems biology: an overview of methodology and applications
RS Wang, A Saadatpour, R Albert
Physical biology 9 (5), 055001, 2012
Reprogramming committed murine blood cells to induced hematopoietic stem cells with defined factors
J Riddell, R Gazit, BS Garrison, G Guo, A Saadatpour, PK Mandal, ...
Cell 157 (3), 549-564, 2014
Challenges and emerging directions in single-cell analysis
GC Yuan, L Cai, M Elowitz, T Enver, G Fan, G Guo, R Irizarry, ...
Genome biology 18 (1), 1-8, 2017
Dynamical and structural analysis of a T cell survival network identifies novel candidate therapeutic targets for large granular lymphocyte leukemia
A Saadatpour, RS Wang, A Liao, X Liu, TP Loughran, I Albert, R Albert
PLoS computational biology 7 (11), e1002267, 2011
Attractor analysis of asynchronous Boolean models of signal transduction networks
A Saadatpour, I Albert, R Albert
Journal of theoretical biology 266 (4), 641-656, 2010
Dynamic reorganization of chromatin accessibility signatures during dedifferentiation of secretory precursors into Lgr5+ intestinal stem cells
U Jadhav, M Saxena, NK O’Neill, A Saadatpour, GC Yuan, Z Herbert, ...
Cell stem cell 21 (1), 65-77. e5, 2017
Single-cell analysis in cancer genomics
A Saadatpour, S Lai, G Guo, GC Yuan
Trends in Genetics 31 (10), 2015
Boolean modeling of biological regulatory networks: a methodology tutorial
A Saadatpour, R Albert
Methods 62 (1), 3-12, 2013
A reduction method for Boolean network models proven to conserve attractors
A Saadatpour, R Albert, T Reluga
SIAM Journal on Applied Dynamical Systems 12 (4), 1997-2011, 2013
Single-cell transcript profiles reveal multilineage priming in early progenitors derived from Lgr5+ intestinal stem cells
TH Kim*, A Saadatpour*, G Guo, M Saxena, A Cavazza, N Desai, ...
Cell Reports 16, 1-8, 2016
Distinct mesenchymal cell populations generate the essential intestinal BMP signaling gradient
N McCarthy, E Manieri, EE Storm, A Saadatpour, AM Luoma, VN Kapoor, ...
Cell Stem Cell 26 (3), 391-402. e5, 2020
Characterizing heterogeneity in leukemic cells using single-cell gene expression analysis
A Saadatpour, G Guo, SH Orkin, GC Yuan
Genome Biology 15 (525), 2014
Revealing the critical regulators of cell identity in the mouse cell atlas
S Suo, Q Zhu, A Saadatpour, L Fei, G Guo, GC Yuan
Cell reports 25 (6), 1436-1445. e3, 2018
Constraint-based network model of pathogen-immune system interactions
J Thakar, A Saadatpour-Moghaddam, ET Harvill, R Albert
Journal of The Royal Society Interface, rsif. 2008.0363, 2008
A comparative study of qualitative and quantitative dynamic models of biological regulatory networks
A Saadatpour, R Albert
EPJ Nonlinear Biomedical Physics 4 (5), 2016
TGFβ signaling underlies hematopoietic dysfunction and bone marrow failure in Shwachman-Diamond Syndrome
CE Joyce*, A Saadatpour*, M Ruiz-Gutierrez, OV Bolukbasi, L Jiang, ...
The Journal of clinical investigation, 2019
Discrete dynamic modeling of signal transduction networks
A Saadatpour, R Albert
Computational Modeling of Signaling Networks, 255-272, 2012
A molecular roadmap for induced multi-lineage trans-differentiation of fibroblasts by chemical combinations
X Han, H Yu, D Huang, Y Xu, A Saadatpour, X Li, L Wang, J Yu, L Pinello, ...
Cell research 27 (3), 386-401, 2017
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