| Deep evidential regression A Amini, W Schwarting, A Soleimany, D Rus Advances in Neural Information Processing Systems (NeurIPS) 33, 2020 | 448 | 2020 |
| Renal clearable catalytic gold nanoclusters for in vivo disease monitoring CN Loynachan*, AP Soleimany*, JS Dudani, Y Lin, A Najer, A Bekdemir, ... Nature Nanotechnology, 1-8, 2019 | 394 | 2019 |
| Synthetic recombinase-based state machines in living cells N Roquet, AP Soleimany, AC Ferris, S Aaronson, TK Lu Science 353 (6297), aad8559, 2016 | 270 | 2016 |
| Uncovering and mitigating algorithmic bias through learned latent structure A Amini*, AP Soleimany*, W Schwarting, SN Bhatia, D Rus AAAI/ACM Conference on Artificial Intelligence, Ethics, and Society, 2019 | 259 | 2019 |
| Evidential deep learning for guided molecular property prediction and discovery AP Soleimany*, A Amini*, S Goldman*, D Rus, SN Bhatia, CW Coley ACS Central Science 7 (8), 1356-1367, 2021 | 145 | 2021 |
| Synthetic and living micropropellers for convection-enhanced nanoparticle transport S Schuerle, AP Soleimany, T Yeh, GM Anand, M Häberli, HE Fleming, ... Science Advances 5 (4), eaav4803, 2019 | 134 | 2019 |
| Protein structure generation via folding diffusion KE Wu, KK Yang, R van den Berg, S Alamdari, JY Zou, AX Lu, AP Amini Nature Communications 15 (1), 1059, 2024 | 131 | 2024 |
| Activity-based diagnostics: an emerging paradigm for disease detection and monitoring AP Soleimany, SN Bhatia Trends in Molecular Medicine 26 (5), 450-468, 2020 | 68 | 2020 |
| Urinary detection of lung cancer in mice via noninvasive pulmonary protease profiling JD Kirkpatrick*, AD Warren*, AP Soleimany*, PMK Westcott, JC Voog, ... Science Translational Medicine 12 (537), 2020 | 65 | 2020 |
| Introduction to Deep Learning: MIT 6.S191 A Amini, A Soleimany MIT, 2018 | 62* | 2018 |
| Spatial uncertainty sampling for end-to-end control A Amini, A Soleimany, S Karaman, D Rus Neural Information Processing Systems (NeurIPS), 2017 | 57 | 2017 |
| Pharmacokinetic tuning of protein–antigen fusions enhances the immunogenicity of T-cell vaccines NK Mehta, RV Pradhan, AP Soleimany, KD Moynihan, AM Rothschilds, ... Nature Biomedical Engineering, 1-13, 2020 | 56 | 2020 |
| Low protease activity in B cell follicles promotes retention of intact antigens after immunization A Aung, A Cui, L Maiorino, AP Amini, JR Gregory, M Bukenya, Y Zhang, ... Science 379 (6630), eabn8934, 2023 | 51 | 2023 |
| Protein generation with evolutionary diffusion: sequence is all you need S Alamdari, N Thakkar, R van den Berg, AX Lu, N Fusi, AP Amini, ... BioRxiv, 2023.09. 11.556673, 2023 | 49 | 2023 |
| Priming agents transiently reduce the clearance of cell-free DNA to improve liquid biopsies C Martin-Alonso, S Tabrizi, K Xiong, T Blewett, S Sridhar, A Crnjac, ... Science 383 (6680), eadf2341, 2024 | 32 | 2024 |
| Multiscale profiling of protease activity in cancer AP Amini, JD Kirkpatrick, CS Wang, AM Jaeger, S Su, S Naranjo, Q Zhong, ... Nature Communications 13 (1), 5745, 2022 | 26* | 2022 |
| Genetic encoding of targeted MRI contrast agents for tumor imaging S Schuerle, M Furubayashi, AP Soleimany, T Gwisai, W Huang, CA Voigt, ... ACS Synthetic Biology, 2020 | 19 | 2020 |
| Feature reuse and scaling: Understanding transfer learning with protein language models FZ Li, AP Amini, Y Yue, KK Yang, AX Lu | 18* | 2024 |
| Activatable zymography probes enable in situ localization of protease dysregulation in cancer AP Soleimany*, JD Kirkpatrick*, S Su, JS Dudani, Q Zhong, A Bekdemir, ... Cancer Research 81 (1), 213-224, 2021 | 18 | 2021 |
| Assessing the limits of zero-shot foundation models in single-cell biology KZ Kedzierska, L Crawford, AP Amini, AX Lu bioRxiv, 2023.10. 16.561085, 2023 | 15 | 2023 |
Sangeeta N. BhatiaJohn J. and Dorothy Wilson Professor of Health Sciences and Technology and Electrical Engineering and Computer Science, Massachusetts Institute of TechnologyVerified email at mit.edu
