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Sean Ryder
Sean Ryder
Professor of Biochemistry and Molecular Biotechnology, UMass Chan Medical School
Verified email at umassmed.edu - Homepage
Title
Cited by
Cited by
Year
Quantitative analysis of protein-RNA interactions by gel mobility shift
SP Ryder, MI Recht, JR Williamson
RNA-Protein Interaction Protocols, 99-115, 2008
1992008
Argonaute protein identity and pairing geometry determine cooperativity in mammalian RNA silencing
JA Broderick, WE Salomon, SP Ryder, N Aronin, PD Zamore
Rna 17 (10), 1858-1869, 2011
1692011
RNA target specificity of the STAR/GSG domain post-transcriptional regulatory protein GLD-1
SP Ryder, LA Frater, DL Abramovitz, EB Goodwin, JR Williamson
Nature structural & molecular biology 11 (1), 20-28, 2004
1482004
Quantitative approaches to monitor protein–nucleic acid interactions using fluorescent probes
JM Pagano, CC Clingman, SP Ryder
Rna 17 (1), 14-20, 2011
1452011
Complementary sets of noncanonical base pairs mediate RNA helix packing in the group I intron active site
SA Strobel, L Ortoleva-Donnelly, SP Ryder, JH Cate, E Moncoeur
Nature structural biology 5 (1), 60-66, 1998
1381998
Molecular basis of RNA recognition by the embryonic polarity determinant MEX-5
JM Pagano, BM Farley, LM McCoig, SP Ryder
Journal of Biological Chemistry 282 (12), 8883-8894, 2007
1272007
Specificity of the STAR/GSG domain protein Qk1: implications for the regulation of myelination
SP Ryder, JR Williamson
Rna 10 (9), 1449-1458, 2004
1062004
Nucleotide analog interference mapping
SP Ryder, SA Strobel
Methods 18 (1), 38-50, 1999
1031999
Allosteric inhibition of a stem cell RNA-binding protein by an intermediary metabolite
CC Clingman, LM Deveau, SA Hay, RM Genga, SMD Shandilya, F Massi, ...
Elife 3, e02848, 2014
1012014
A minor groove RNA triple helix within the catalytic core of a group I intron
AA Szewczak, L Ortoleva-Donnelly, SP Ryder, E Moncoeur, SA Strobel
nature structural biology 5 (12), 1037-1042, 1998
1011998
The ssDNA mutator APOBEC3A is regulated by cooperative dimerization
MF Bohn, SMD Shandilya, TV Silvas, EA Nalivaika, T Kouno, BA Kelch, ...
Structure 23 (5), 903-911, 2015
992015
A quantitative RNA code for mRNA target selection by the germline fate determinant GLD‐1
JE Wright, D Gaidatzis, M Senften, BM Farley, E Westhof, SP Ryder, ...
The EMBO journal 30 (3), 533-545, 2011
962011
A conserved three-nucleotide core motif defines Musashi RNA binding specificity
NR Zearfoss, LM Deveau, CC Clingman, E Schmidt, ES Johnson, F Massi, ...
Journal of Biological Chemistry 289 (51), 35530-35541, 2014
832014
Nucleotide analog interference mapping of the hairpin ribozyme: implications for secondary and tertiary structure formation
SP Ryder, SA Strobel
Journal of molecular biology 291 (2), 295-311, 1999
811999
Investigation of adenosine base ionization in the hairpin ribozyme by nucleotide analog interference mapping
SP RYDER, AK OYELERE, JL PADILLA, D KLOSTERMEIER, DP MILLAR, ...
Rna 7 (10), 1454-1463, 2001
722001
RNA recognition by the embryonic cell fate determinant and germline totipotency factor MEX-3
JM Pagano, BM Farley, KI Essien, SP Ryder
Proceedings of the National Academy of Sciences 106 (48), 20252-20257, 2009
702009
[6] Chemical probing of RNA by nucleotide analog interference mapping
SP Ryder, L Ortoleva-Donnelly, AB Kosek, SA Strobel
Academic Press 317, 92-109, 2000
692000
The N-terminal peptide of the syntaxin Tlg2p modulates binding of its closed conformation to Vps45p
MLM Furgason, C MacDonald, SG Shanks, SP Ryder, NJ Bryant, ...
Proceedings of the National Academy of Sciences 106 (34), 14303-14308, 2009
682009
Quaking Regulates Hnrnpa1 Expression through Its 3′ UTR in Oligodendrocyte Precursor Cells
NR Zearfoss, CC Clingman, BM Farley, LM McCoig, SP Ryder
PLoS genetics 7 (1), e1001269, 2011
642011
RNA target specificity of the embryonic cell fate determinant POS-1
BM Farley, JM Pagano, SP Ryder
Rna 14 (12), 2685-2697, 2008
612008
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