| survcomp: an R/Bioconductor package for performance assessment and comparison of survival models MS Schröder, AC Culhane, J Quackenbush, B Haibe-Kains Bioinformatics 27 (22), 3206-3208, 2011 | 408 | 2011 |
| Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer DMA Gendoo, N Ratanasirigulchai, MS Schröder, L Paré, JS Parker, ... Bioinformatics, btv693, 2015 | 304 | 2015 |
| The GenomeAsia 100K Project enables genetic discoveries across Asia the GenomeAsia100K Consortium Nature 576 (7785), 106–111, 2019 | 253 | 2019 |
| Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin G Wu, H Zhao, C Li, MP Rajapakse, WC Wong, J Xu, CW Saunders, ... PLOS Genet 11 (11), e1005614, 2015 | 233 | 2015 |
| GeneSigDB: a manually curated database and resource for analysis of gene expression signatures AC Culhane, MS Schröder, R Sultana, SC Picard, EN Martinelli, C Kelly, ... Nucleic Acids Research, gkr901, 2011 | 144 | 2011 |
| The Indian cobra reference genome and transcriptome enables comprehensive identification of venom toxins Nature Genetics 52 (1), 2020 | 138 | 2020 |
| Comparative Phenotypic Analysis of the Major Fungal Pathogens Candida parapsilosis and Candida albicans LM Holland, MS Schröder, SA Turner, H Taff, D Andes, Z Grózer, ... PLoS Pathogens 10 (9), e1004365, 2014 | 124 | 2014 |
| Comparative genome analysis and gene finding in Candida species using CGOB SL Maguire, SS ÓhÉigeartaigh, KP Byrne, MS Schröder, P O'Gaora, ... Molecular Biology and Evolution, 2013 | 121 | 2013 |
| Multiple Origins of the Pathogenic Yeast Candida orthopsilosis by Separate Hybridizations between Two Parental Species Markus S. Schröder, Kontxi Martinez de San Vicente, Tâmara H. R. Prandini ... PLOS Genet 12 (11), e1006404, 2016 | 62 | 2016 |
| Controlled Cycling and Quiescence Enables Efficient HDR in Engraftment-Enriched Adult Hematopoietic Stem and Progenitor Cells JJ Shin, MS Schröder, F Caiado, SK Wyman, NL Bray, M Bordi, MA Dewitt, ... Cell Reports 32 (9), 108093, 2020 | 54 | 2020 |
| Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis Y Zhu, PG Engström, C Tellgren-Roth, CD Baudo, JC Kennell, S Sun, ... Nucleic Acids Research, gkx006, 2017 | 46 | 2017 |
| Integrated genomic analysis reveals mutated ELF3 as a potential gallbladder cancer vaccine candidate A Pandey, EW Stawiski, S Durinck, H Gowda, LD Goldstein, ... Nature Communications 11 (1), 1-13, 2020 | 45 | 2020 |
| PnB Designer: a web application to design prime and base editor guide RNAs for animals and plants SM Siegner, ME Karasu, MS Schröder, Z Kontarakis, JE Corn BMC bioinformatics 22 (1), 1-12, 2021 | 43 | 2021 |
| Significance analysis of prognostic signatures AH Beck, NW Knoblauch, MM Hefti, J Kaplan, SJ Schnitt, AC Culhane, ... PLoS Comput Biol 9 (1), e1002875, 2013 | 41 | 2013 |
| RamiGO: an R/Bioconductor package providing an AmiGO Visualize interface MS Schröder, D Gusenleitner, J Quackenbush, AC Culhane, ... Bioinformatics 29 (5), 666-668, 2013 | 40 | 2013 |
| The CgHaa1-Regulon Mediates Response and Tolerance to Acetic Acid Stress in the Human Pathogen Candida glabrata RT Bernardo, DV Cunha, C Wang, L Pereira, S Silva, SB Salazar, ... G3: Genes| Genomes| Genetics 7 (1), 1-18, 2017 | 29 | 2017 |
| ATF4 Regulates MYB to Increase γ-Globin in Response to Loss of β-Globin MY Boontanrart, MS Schröder, GM Stehli, M Banović, SK Wyman, RJ Lew, ... Cell Reports 32 (5), 107993, 2020 | 23* | 2020 |
| Identification of African-Specific Admixture between Modern and Archaic Humans JD Wall, A Ratan, E Stawiski, the GenomeAsia 100K Consortium AJHG 105 (6), 1254-1261, 2019 | 21 | 2019 |
| Effect of progesterone on Candida albicans biofilm formation under acidic conditions: A transcriptomic analysis B Gonçalves, R Bernardo, C Wang, MS Schröder, NA Pedro, G Butler, ... International Journal of Medical Microbiology 310 (3), 151414, 2020 | 20 | 2020 |
| Using RNA-seq for Analysis of Differential Gene Expression in Fungal Species C Wang, MS Schröder, S Hammel, G Butler Yeast Functional Genomics: Methods and Protocols, 1-40, 2016 | 15 | 2016 |
Benjamin Haibe-KainsScientist (Principal Investigator), Princess Margaret Cancer Centre, University Health NetworkVerified email at uhnresearch.ca
